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2026-01-15 10:48:26, GGRNA.v2 : RefSeq release 232 (Sep, 2025)

LOCUS       XR_008638132            1854 bp    RNA     linear   VRT 07-MAY-2025
DEFINITION  PREDICTED: Misgurnus anguillicaudatus vimentin (vim), transcript
            variant X2, misc_RNA.
ACCESSION   XR_008638132
VERSION     XR_008638132.2
DBLINK      BioProject: PRJNA955227
KEYWORDS    RefSeq.
SOURCE      Misgurnus anguillicaudatus (oriental weatherfish)
  ORGANISM  Misgurnus anguillicaudatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Cobitidae; Cobitinae; Misgurnus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_073361) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 7, 2025 this sequence version replaced XR_008638132.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_027580225.2-RS_2025_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/24/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Misgurnus anguillicaudatus"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:75329"
                     /chromosome="25"
     gene            1..1854
                     /gene="vim"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 15 Proteins"
                     /db_xref="GeneID:129425395"
     misc_RNA        1..1854
                     /gene="vim"
                     /product="vimentin, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:129425395"
ORIGIN      
tataaattcaagcagaacctccgcagtggtctcggttgggcaggacaagctgagggtcttcggtgcgcagtagttgatattcaaagtgaaagtagtcgctgacttgaagaaatccctaaaactaaaggattacaagatggcaagccgatcaaccgcttcttcttatcaaaggatcttcggtggagaacgtcccgcgatgactcggtcaagttatcagtacagcagccctgtccgcgcatcctcaacctcgcgcgtctcctacagcgcgttctccgcgcctccatccatctacactcaaaggagctcacgaatgcgcaccagcgcgcccatgcccaggctcgccaccgatacactggatttcggggtcgctgacgccatcaacaccgagtttagaaccaaccgaaccaatgagaaagcggagatgcagcacctcaacgacaggttcgcaagttacatagagaaagtgaggtttctggagcagcagaataagatcttgatcgcggagctggatcagttgaagggtcagggtaagtccaggatcggagacctctatgaggatgagatgagagagttgagaaaacaagtggaccagctctccaacgacaagacaagggtggaagtggagcgggacaatatgggcgaggacatccagcgccttaaagaaaggcttcaagaagagatgcttcaaaaggaggatgctgagaacaccctacggagtttcagacaggatgttgacaacgcctctcttgctcgtctggatctggagagaaaagtggagtccttggaggaggagattgctttcttaaagaaactccacgatgaggaaatggccgagctgcaaatgcagatccaggagcagcatgtgcagattgatatggaagtggccaagcctgacctcaccgctgcacttaaagatgttcgcgttcagtacgagactctggctgctagaaacctccaggaatctgaggactggtataaatctaagtttgcggatctgtccgaagctgctgctcgtaacaacgatgccattcgtgtggccaagcaagaggccaatgactaccgtcgtcaactacaatctctcacctgtgacatagaagctcttaaaggaaccaatgagtccatggagcgtcagatgagggagatggaggagagctttaacaacgaggcatccggataccaggacgccatcgcacgcctagagagcgacattcgaaacatgaaggatgagatggctcgtcatcttcgtgaataccaggatctgctgaatgtcaaaatggccctggacattgagatcgccacctataggaagctgctggagggcgaggagagcagagtctatgaaggagaccaaacctttcactgacaacttgcctaagcctaaggtggtgatcaagaccatcgagacaagagacggacatattatcaatgagtccagccaaaatgacatggaatgagctgcatctgagcacaaaaggcaccagagagctgaacgctggtatagaataaagaggaagaattagaagaagatttcttttccttgtttctgttgaaaattttaaagaaaagctttaaagtgccttttatttgcattgccacgttagaaaggtctgtcgatagagctgatgctgatacactgtaggccactgagaaaaccagcgttatttgagtttatgtttaccacgatgtatgtagtttacacactgttgaagaccacagcaatactgctgcaaactttctgtattgtatactgtagtcattgcagttgaccaaaaacttgaggagcttttgtttcttaagacgaccaaagtgtcaacaaatttccacaaatcaaataaaccttttaagtaacacgta
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]