2024-11-21 18:41:34, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XR_007165733 3899 bp RNA linear VRT 01-AUG-2024 DEFINITION PREDICTED: Anser cygnoides NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, misc_RNA. ACCESSION XR_007165733 VERSION XR_007165733.2 DBLINK BioProject: PRJNA1136952 KEYWORDS RefSeq. SOURCE Anser cygnoides (Swan goose) ORGANISM Anser cygnoides Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_089877) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2024 this sequence version replaced XR_007165733.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_040182565.1-RS_2024_07 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 07/23/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3899 /organism="Anser cygnoides" /mol_type="transcribed RNA" /isolate="HZ-2024a" /db_xref="taxon:8845" /chromosome="5" /sex="female" /tissue_type="blood" /geo_loc_name="China: Taizhou" /collection_date="2022-10" /breed="goose" gene 1..3899 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106033504" misc_RNA 1..3899 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X2" /db_xref="GeneID:106033504" ORIGIN
aaaccataagactgttcattattttcccagttcctttacggagggcatattcaatgattctattaaatgtgaatggtgtccccactggtcaggggacttaaaaattgctgattgcaggagtttatttcttccttaagcctgcactaccaccatttgaggcaggctctctggccagacggaccttcagttggggcttcactcccagcgtggtgcatgacggaaaacggggtagcaaggaagaaaaggctgcttttggctatggaaaccccatctccatcttttccccgcgggctgaagagtaatcccctccttcagtcccgtcagcggaggcccggagaatatacgacgcccccagcgcagacaccttcctcgctcaacgcccaccgcgggccgcccgccattttgggagccggggcaggcgaactacatctcccagcaggcccggcgccgcggcgccatcttgccccttcgctccgcggggcagctctggcaggcagcgcgggcggtgagcggggctatggcgctgttcccggcctttgccggtgccgccgagcccggggagaccccagccggcagaagcgagggctccaggaaagacctggactggctgagtaacccaagcttctctacagaagatgcactgttagtgcatcaacgcactacagaagctgcaaattctacccctgaaaaatcaccactaataaggactacttcaagatcagagctgtcaggggaaagtgattcagatgagaatctgaaaaagtcaagtaagaaaaggagaaagaagaagaaaaagcatcaccactataagacaaaaaagaaagccaaaggggactccagtagcagcgaatcagacttggacactaagcacgtcaaggacagagctacagcaagtggcagaaatcgtgaaaaggaagcagcagcgaatctaggtgatacaacatcaaatcttaccaacaaccgctttgtttggcttgatgatatccaggctttcacagcagaaaccttcaggatagacaagaaatcagatcctgcaaactgggcctacaaatccctgtatcgaggggacattgcaagatataaaaggaaaggagagtcctgtcttggcatagatgcaaagaaacaatgtataacttgggacagtcctgcatcccaaaagaagcaattgcagaggcgacctgagcgctacttctcaaagaacaatgtgaagacattgaacacagatgggattcctgtttgcaataaaagttctccatctgactcagctgcttttataccagttttccaaacggaaagcagtgatccttctgacacaacagaggtaaaccctcttgggatttatgatccatcaactacagtgtggctgcaaggaaaaggatacaaaggtgcagaacatgagcctgtaaatacacagcagccatttcaggagtctgggataaatgttaaccccattctaatgacaaaagtggaagaatataacaagaaagtaagagaaaacccaagagatattaatgcttggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccctatgcaagtatgggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaaactagctattttagagagggcaattgaaagcaatccaagcaatgttgacctgaaactcgccaggttgaaggtttgcgcagagttctgggaaccaccagctttgatcaaagaatggcagaagctaatcttcatacatcccaataacccagaactgtggaagaaatatcttctgttctgtcaaagtcagttcagtaccttttctgtttcaaaaatcaatgggctctatggaaaatgtttgactactctggcagccgtacaggatggcagcatggtgtcacatcctccactgccaggcacagaagaagctatgctagctatatttattcagcaatgccacttcctgagacaggctggccattctgagaaagcggtgtctttatttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccaacaaagggacaggtggagttctttgaacccttttgggatagtggagaaccacgaattggagaaaaaggagcaagaggctggagggcatggatgcaccaagaagaaaagggtggctggattgctgttgacaagcctgatgatgatgatgaagaagagatagatgaagatgaagaaataaaggataaaactctccccaagtggcacatttggctggatattgaatattctcgtgaagcaagacattggttaccctggaggccagacaaaaccaaaaagcaaactgaagaagactgtgaagatccagaaagacaggtattatttgatgatcttggaccatctatgatccagctttctaatccagaccttcaacatcaactgttgtactcatttttgcaattcctgggagtgccatgtataaataaactctttcctcccaacctctatattgccatggatgaaaataacatctttgacaatgtactttccgatgaaaagccgctgacttctgttgatgtgccactgtctggattcaacagtattggtcatatggacacgatgctaagaggcagacagcatataggccactataaagatggagaggagttcatacagaacgtttttcatgctctatatctgctattttcaggaaaggaaaaatctcacctgtccatttgttggttacagtatgaaatatctaaggtagttcagtgtctccaaacaaaaaacaagaagaagctgaaagcacaagggaggaaaagtaaaaaattggccaagaatctccttaaagcacctgacaaccgaaatgacctttctctctggaaactgtatgcctacctagagtggctgcttggtaacatcgatgatgctaggaaggtatttgatacagctcttagcacagcagagacgggaggattgaagagtcccaagctgtgcagcctcagtctgctttatgctcagctggaagtggaactactgaaaagcctggaaggagctgtcacgtcacgtgctgttcatatattgactaaattgactgaaagtggaccatatgtgccctataatggacaagtgttatctgttaatgtcttgaaagctcgtaagacgtatgagcatgcagtgcaagattatttaagtaaagcaccagtttctgatcgggatcaggtcggtgagtctaaccagctggtgaacttggttggttgttacgcagtgttccagtacttgactgttgggatcgatgctgcggtattgatatatgcacaggctttggaaaagcttcaagttcctgctccagaggaatgtgaaaataccggagcgaattctggcgttcaaaatcttcccagtgctcttgaagctgtcacactgctgcacacaaatttactcaggttccacatgaaaattagtgtttatcctttgaatcctttgcgagaggccctaacggaggcgctgaggcgatatcctagcaaccagtccctctggaggtcgtacatccaggtccaagggaagtctcacactgctagcaaagcacgaaggttttttgatggtgtcacaaggtctaccaactctttagagccgtggctgtttgcaatccaagcagagcagttgagaaaaaaacttactgagcacgtccagagatgttggtgaaatatattccactattcctgaaactgggttaacgaataggattatagctctatttgaacatgcaattcagagtgagaatggtacccattgtccgctgctgtggagaatgtatttgaactttctggtttcagtaggaaaaaaagaaaaaagtaaaggattgttttataaagccattcagaactgtccttggacaaag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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