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2024-03-29 01:07:27, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_006740066            3413 bp    RNA     linear   MAM 22-DEC-2021
DEFINITION  PREDICTED: Pipistrellus kuhlii NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X3,
            misc_RNA.
ACCESSION   XR_006740066
VERSION     XR_006740066.1
DBLINK      BioProject: PRJNA666119
KEYWORDS    RefSeq.
SOURCE      Pipistrellus kuhlii (Kuhl's pipistrelle)
  ORGANISM  Pipistrellus kuhlii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera;
            Vespertilionidae; Pipistrellus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_023425404.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pipistrellus kuhlii Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3413
                     /organism="Pipistrellus kuhlii"
                     /mol_type="transcribed RNA"
                     /isolate="mPipKuh1"
                     /db_xref="taxon:59472"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="flight muscle, heart, brain, liver, kidney"
                     /dev_stage="adult"
                     /country="Italy: Bergamo"
                     /lat_lon="45.7430 N 9.5831 E"
                     /collection_date="2017"
                     /collected_by="Emma Teeling, Andrea Locatelli"
     gene            1..3413
                     /gene="NRDE2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 13 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:118714053"
     misc_RNA        1..3413
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X3"
                     /db_xref="GeneID:118714053"
ORIGIN      
aaccaagtcattctaagtcatgcacttaacgtggtggagtccagttgtatctgacgaggctcctttgtacacatatcccctcagatggctcttacatctgtattttgaattagattggctgagcaacccaagcttttgtgttgaaaccgtcacatctctgagccagcaagctgaagaggccgcagctctagtctctgaagagtcactgctgacgaggagtcctctgaaatcagagctgtcagatgaaagtgactcgaacagaaacctccgacaagcaagcaggaaaaagaagaaggagaaaaggaagaaaaggaagcatcagcaccacaagaaaaccaagagaaaacgtgggcagtcaagtagcagtgggtctgagccagacactgactctgacaaggacaaatcccccagaggcctcagaggcggtaacagaggactggagacactgagccaagacaatgctgctgctgctgctgggccccgctgtgtttggctggaggacatccaggctctgacaggagaaacctttagaacagataagaaaccagatcctgcaaactgggagtacaagtctctctaccggggagatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgcatatcctgggagggggcgcccacggaaaagaagcgggcacacaagcacgtggagcgctatttcacgaagaagaacgttgggctgatgagcgcggacggcgttgccgttagcagtaaagcggaccctccctcgtctgcggccggctccttcatccctgtgaaggactcggacgatgtggttcctcctgttacaacctggttgaaccctctggggatttatgatcagtccaccacccattggttacaaggacaaggtcccacagagcaggaatccaagcagccggactcacagccagaccacaagagctcgcttctcaaggcccgggtggaggagtttaacaggagggtgcgggagaaccctcgggacactcagctgtggatggcgttcgttgctttccaggacgaggtcatgagaagccctggcctgtatgccatcgaggagggcgagcaggagaagcggaagcgctccctgaagctcatcctggagaagaagctggccatcctggagcgggccatcgacagcaaccctagcagcgtggacctgaagcttgccaagctgaagctctgcgccgagttctgggagccctccacgctggtcaaagagtggcagaaactgatcttcctgcaccccaacaacacagccctttggcagaaatacctcttgttttgccagagccagtttagcaccttttcgatatccaaaattcacagcctttatggaaagtgcttgagcacactgtctgctgtgaaggatggcagcatcttatctcaccctgagctgcctggcaccgaagaggccatgtttgcgctcttcctgcagcagtgccacttcctgcgccaggccgggcacgccgagaaggccgtctccttgttccaggccatggtcgacttcaccttcttcaaacccgacagcgttaaagacctgcccgcccgcggacaggtggagttcttcgagcccttctgggacagcggagagccccgggctggagagaagggcgcccgcggctggcgggcgtggatgcaccagcaggagcggggtggctgggtggtcatcaacccagatgaggatgatgatgaaccagaagaggatgaccaggacatcagagataagactctgcccaaatggcagatctggcttgctgctgagcgatcccgagaccagaggcactggcggccgtggcgccctgataagaccaagaagcaaacggaggaagactgtgaggatccagagagacaggtgctgtttgatgatatcggacaatctctaatccgactctccagccaggctcttcagttccagctgattgtggccttcctgcagttcttgggcgtgcctgctggcttcagccctccagcctcctgcctctacctggccatggatgagaacagcgtcttcgacaacgtgctttacgacgaacagccattgacttctcccaacctttcattttctggcgtcagctgtgtcggtcgcacggaccagttgggctgtcggcgctggaccaggggtcacagccgagagggcgaggagttcatccgcaacctcttccacctggtgatgcctctgttctcaggcccggagaggtcccaactctgctcctcctggctacggtacgagatcgcaaaggtcatttggtgcctgcacactaaaaacaagaagaggttaaaatcaagaggaaagaactgcaaaaaactagccaagaacctccttaaggagccagaaaaccgcaacaatgtttgcctctggaagcagtatgcacatctggaatggttgcttggcaacacagaggacgccagaaaagtgttcgatacagcactcagctcggcagggagccgggagctgaaggacccggaggtctgtgagcttagtctgctctatgctgcgctggagctggagctggcgccggacaccagagtggccaccacggcccgagctgtccacatactcaccaggctggctgagagtggtccctacgggccctacactgggcaggtcctggccgttcacattctgaaagctcggaaggcttacgaacatgcactgcaggactgtttgggtgagagctgtgtctctgatccagctgccgccgcctcccttaaccgcctagtcagcgtggttaaatgctttatgctcttccagtatctgaccacagggatcgatgccgctgtgcagatacacgagcaggtgtttgcaaaactgaagggcgctctccccgcagaaggcccgggcctggaggccagtgcctgccccccgagcgtgagcgtgagcagcgtcctcgaggcggtcacactgatgcacacgagcctgctcaggttccacatgaaagtcagcgtctaccctctggctcccctgcggcaggcgctctcggaggctctgaggttgtatccaggcaaccaggttctgtggcggtcctacgtccagattcagagcaagtcccacagcgccaaccggaccaggaggttcttcgacgcagtcaccaggtctgcgaaacccttggagccttggctgtttgccattgaggctgagaaaatgaggaagagactggtagagaccgtccagagatggcagagaggtctacgccacgattcctgagaccggcttgacgcaccggatcagagccctgtttgagaacgccatccggagtgagcacggcagccagtgccccttactgtggaggatgtacttgagttttttggtttcgttaggaaacaaggacagaagcaagggtgtgttctacaaagcacttcagagttgtccttgggcaaag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]