2024-04-25 05:42:11, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_006737687 3757 bp RNA linear PRI 21-DEC-2021 DEFINITION PREDICTED: Lemur catta NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X4, misc_RNA. ACCESSION XR_006737687 VERSION XR_006737687.1 DBLINK BioProject: PRJNA779062 KEYWORDS RefSeq. SOURCE Lemur catta (Ring-tailed lemur) ORGANISM Lemur catta Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Lemur. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_059128.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Lemur catta Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3757 /organism="Lemur catta" /mol_type="transcribed RNA" /isolate="mLemCat1" /db_xref="taxon:9447" /chromosome="1" /sex="male" /tissue_type="spleen" /dev_stage="juvenile" /country="Denmark: Copenhagen Zoo" /lat_lon="55.67278 N 12.52139 E" /collection_date="2015-12-16" /collected_by="Mads Bertelsen" gene 1..3757 /gene="NRDE2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 97 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:123645618" misc_RNA 1..3757 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X4" /db_xref="GeneID:123645618" ORIGIN
cgccaggaaaaccacacttcccagagagcaccgcgacggcggaggcctcaggccggcgccgctggcgccatttctgtagagagaaacggcagtgtggcctgtagtcatggcgctgttcccggcctttgcaggggttagtgaggccccagatagcgggagctccaggaaagagttagactggctgagcaacccaagcttttgtgttggatccataacgtccctgagtcaacagactgacgcagccacagcccttgtttctgaagggtcaccactgacaaggagtcctctgaaatcagagccttcagatgaaagtgacactaacaaaaaggtcaaacaagcaagcagaaaaaagaagaaagagaaaaagaagaaaaggaagcatcagcaccagaagaaaaccaagagaaaacacgggcagtcgagcagcagtgggtctgagccagacaccgattctgaaagggacaagtctctctgtagcatcggaggcagtaaaaaggagtctgggcaactgagtcaaggagataattctgttgctgatgttggacatcgctttgtttggcttgaggacgttcaggctcggacgggagaaaccttcagaacagataagaaaccagatcctgcgaactgggagtataagtctctctaccggggggatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgcatatcttgggaaggggcttctgccgagaggaagcgttcacgcaagcaggctgaacgctactttacgaagaagagtgtgggattaatgaacatcagcggagttgctgttaacagtaaaagtgaacctccctcatctgagccaatttcctttataccagtgaaggactcggatgacgtggctcctcctgtaacaacctggttgaatcctctgggcatttatgatcagtcaactacacagtggttacaaggacagggtcctccagagcaagaagcaaagcagccagactcactggcagacagcgagaatgcagttctcaaggccaaggtggaagagtttaacaggagggtgcgggagaatcctcgggatattcagctgtggatggcatttgttgcttttcaggacgaggtcatgaaaagtcctggactgtatgccattgaggaaggagagcaggaaaagcgaaagaggtccctgaagctgattctggagaagaagctggccattctggagcgggccatcgaaagcaaccagagcagtgtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccgctctggtcaaagaatggcagaaactgatatttttacatcccaataatgcaaccctgtggcagaaataccttttattttgccagagccagtttagtactttttcgatatcaaaaattcacagtctttatggaaagtgcttgagtactttgtctgccgtgaatgatggcagcatcttgtctcaccctgcactgcctggcacggaagaggccgtgtttgcactctttcttcagcagtgccactttttgcggcaggctggccactcggagaaggctgtctctttgttccaggccatggttgacttcaccttcttcaaacccgacagtgtgaaagatctatctaccaaagcacaggtggaattctttgagcccttttgggacagtggcgagccccgggctggggagaagggagcccgaggctggaaagcatggatgcaccagcaggagcgcggtggctgggtggtgatcaacccagatgaggatgacgatgaaccagaagaggacgaccaggaaataagagataagactctgccccgatggcagatctggctcgatgtcgagcgctcccgagaccagaggcactggcggccctggcgccctgataagaccaagaagcaaactgaggaagactgtgaggatcccgagagacaggtgttgtttgatgatattggacaatctttgatcagactttccagccaagatcttcagttccggctgattgaggcctttctgcagttcttaggtgtgccctctggcttcatccctccagcctcctgccttcatctggccatggatgagaacagtatctttgataatggactttatgatgaaaagcccttgacctttttgaatcctccattttctggggtcagctgtgttggccgcatggacaggttgggctgtcctcgctggactaggggtcacaatcgagagggtgaggagttcatccgcaacgtcttccaccttgtgatgcctttgttttcaggcgaggaaaagtctcggctctgttcctcctggttacaatacgagattgcaaaggttatttggtggctgcacactaaaaacaagaagagattaaagtcacaagggaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaactgcaacaacttttgcctctggaagcagtatgctcatctggagtggttgcttggcaacatagaggatgccagaaaagtttttgatacagcacttagcatggcaggaaacaaagaactgaaggaccctgaactctgtgagctcagtctgctctatgccgaactggaggtggagctgtcaccagactcaagaggagccaccacagcccgagctgttcatgtattgaccaggctgactgagagcagtccctatgggccctataccggacaggtcttggctgtgcacattttgaaagctcgaaaggcttatgagcatgcactgcaggactgtttgggtgaaagctctgtctccaatccagctcccaccgattcctttaaccacctcattagcttggtcaaatgctttatgctcttccagtatttgactatagggattgatgccgctatgcggatatataaggaagtatttgcaaaactgaatagctctgtttcccccgcaggctctgtcgtggaggacagtgccagttctcagagtttgaccagtgttcttgaggccatcactctgatgcacacgagcctgctccgattgcacatgaaagttaccgtgtatcctctggctcctctgcgggaggcgctctcagaggccttaacattgtatccgggcaaccaggttctttggaggtcctatgtacagattcaaaataaatcccacagtgccagcaagaccagacgattttttgatacaatcaccaggtccaccaaacccctggagccttggttgtttgcaattgaagctgagaaaatgaggaaaagactggtggaagctgttcagagggtagacggtagagaggtctacaccacgattcctgagaccggcttagcacatcggatcaaagccctgtttgaaaatgcaatgcggagcgacagtggcagccagtgccccttactgtggaggatgtatttgaactttttggtttcgttaggaaataaagaaagaagcaaaggtgtattctacaaagcgcttcaaaattgtccttgggcaaaggtagctggtttcccagcatttgcccggagttcagcccagatgctgaaagagttggaatccccgtcccaactctgcttgcagagcccaggccaggaatcaaattgatggggactgcagtgtctgtcaacgactctgccccacctctgaaagaaggcctgcctcagagcttacccactctctgcgtttgtgctgtacatggacgccgtggagtacttccccgaggagacgcaggagatcctggatctgatgaccgagaaggagctccgggtgcgcctgccg
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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