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2024-04-19 12:00:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_006413058            1015 bp    RNA     linear   INV 16-OCT-2021
DEFINITION  PREDICTED: Tribolium madens systemic RNA interference defective
            protein 1-like (LOC123009934), transcript variant X7, misc_RNA.
ACCESSION   XR_006413058
VERSION     XR_006413058.1
DBLINK      BioProject: PRJNA771348
KEYWORDS    RefSeq.
SOURCE      Tribolium madens (black flour beetle)
  ORGANISM  Tribolium madens
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga;
            Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis;
            Tribolium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_025400983.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Tribolium madens Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Tribolium madens"
                     /mol_type="transcribed RNA"
                     /isolate="multiple individuals"
                     /isolation_source="laboratory strain"
                     /db_xref="taxon:41895"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="Pooled whole body"
                     /dev_stage="Late pupae"
                     /country="USA: Kanssas"
                     /collection_date="2012"
                     /breed="KSU strain"
     gene            1..1015
                     /gene="LOC123009934"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:123009934"
     misc_RNA        1..1015
                     /gene="LOC123009934"
                     /product="systemic RNA interference defective protein
                     1-like, transcript variant X7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:123009934"
ORIGIN      
ggtgaagttgtaccaaaatcgacattcggatgtcacaccgacggcttataccacttttagtatactgggaggaacgattttgtgcgaaattaatatctcctacaattatttttcgtgttctcgaacaacataaaaattacaatttttgttcattgtgcggctcaggaagatattttttggtagatggaaacttaaaatgttctacgacaattgactgtaaatgatgaaatatgttctaaactgatgcgtcatggtgttggatattaaaattacatacagggtgtgtcagtaccgtggagggagaaataaaaaatgctcttggcacgattgggatcattttcaagggccctcccatatttgtcgctgttgtaatcatcgtttttctccttttgttgatttacatatccttgaacatttattacttcggggctgctcgcaacgttttgcgacggtttcggcaacgaaatttcgaagacccaaaccttgcaccaccaaacacacatcgttggcggtcacttataattgcagttgcaataaatattgcaataatcatattgggactagttttgttatattgcacagacaaaatcaattttggaagttttattttactaattttagcaagcaatgctttattatacaccctgatgtatacctgcatgaagagatgtgtttatggtgaaagaatttgcgttcaagcagtcatttatggggtcctcgcagcggcatgtttgatcccatctggaatgttcttcttcaaccagagctcaaaatggacgaaaagtccagctcaatcccgccaactcaaccaacaatgcatcttcgcggacttcttcgacagccacgacctctggcactttttcagctccatggcactctacttctccttcatgtacttgttgtgtatcgacgacaacctttacgaaagacgcacaaatatccctttattctaaaataaataaaaactttttgtgatattttgtctggagttaacattaaataactcaatacctaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]