ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2025-12-23 04:48:08, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_005781792 818 bp RNA linear MAM 01-AUG-2025
DEFINITION PREDICTED: Herpailurus yagouaroundi uncharacterized LOC121011838
(LOC121011838), ncRNA.
ACCESSION XR_005781792
VERSION XR_005781792.1
DBLINK BioProject: PRJNA717316
KEYWORDS RefSeq.
SOURCE Herpailurus yagouaroundi (jaguarundi)
ORGANISM Herpailurus yagouaroundi
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae;
Felinae; Herpailurus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024412426.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Updated annotation
Annotation Name :: GCF_014898765.1-RS_2025_07
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.4
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 07/31/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..818
/organism="Herpailurus yagouaroundi"
/mol_type="transcribed RNA"
/isolation_source="originally collected by Mitchell Bush
(The Center for Species Survival, Department of
Reproductive Sciences, Smithsonian Conservation Biology
Institute, Smithsonian's National Zoological Park, 1500
Remount Road, Front Royal, VA 22630, USA) from Blijdorp
Zoo, Rotterdam, Netherlands (Director Dirk Van Dam) from a
breeding male juguarundi from Mexico"
/db_xref="taxon:1608482"
/chromosome="Unknown"
/sex="male"
/cell_line="HYA-1"
/tissue_type="fibroblast cell line, passage 10"
/ecotype="Mexico"
/collection_date="Dec-1981"
gene 1..818
/gene="LOC121011838"
/note="uncharacterized LOC121011838; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 100%
coverage of the annotated genomic feature by RNAseq
alignments, including 14 samples with support for all
annotated introns"
/db_xref="GeneID:121011838"
ncRNA 1..818
/ncRNA_class="lncRNA"
/gene="LOC121011838"
/product="uncharacterized LOC121011838"
/db_xref="GeneID:121011838"
ORIGIN
tttttcttagcatgtcagaacgttgggtaacattatctccattttaaacaaaagaaaactaaagctctgagaaggaaaatgtcttcctcaaattcaaatacattcagctggctgcagttatattttgctcactgttatagcctcaggatctttcagagtcactggaatatgtcttgcacctgttctgctctggcgcaggattgttgaagatggcagaggagaaatggacgtgcccagaagaggagcagagccccacaccaccgtgaagggcttgggcatcagcgatcatgatttctctgcatctcctcacggtgctcaacgaatataaaacagcagcagttcccagctcagagaccccaccctgaaatattccccaccaaagtcaagcgggctgcaaataacctgagggagcaatgatttcccttcccgaagccctcgggatcaattagaactaatcaaagatttggcccaagaattataaattggaattgatataaagtacttcacttccaaacacctcattcttcccaaaatgatgattcaaataattgacattctgaatgagactgaaaaatgtgctttgggaagaagatgagattcctttgccgaacaatagattcagtatttttggaatgactgagaacaacaaagataaaatacccaaacctacctcatgagtcagtcaagctaaaaaaccagacgttgccattatccaagttaagcgaacaatgctttcttaattatttgttctaatcagtcaaaggtcagcatgacctaggatctgactctaagtctgctgaagagaaaacaccttaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]