2024-04-20 17:57:52, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_004585582 1929 bp RNA linear PLN 14-MAY-2020 DEFINITION PREDICTED: Prunus dulcis uncharacterized LOC117626505 (LOC117626505), transcript variant X3, ncRNA. ACCESSION XR_004585582 VERSION XR_004585582.1 DBLINK BioProject: PRJNA631757 KEYWORDS RefSeq. SOURCE Prunus dulcis (almond) ORGANISM Prunus dulcis Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_047653.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Prunus dulcis Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1929 /organism="Prunus dulcis" /mol_type="transcribed RNA" /db_xref="taxon:3755" /chromosome="4" gene 1..1929 /gene="LOC117626505" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns" /db_xref="GeneID:117626505" ncRNA 1..1929 /ncRNA_class="lncRNA" /gene="LOC117626505" /product="uncharacterized LOC117626505, transcript variant X3" /db_xref="GeneID:117626505" ORIGIN
agccccaaccattggggatagcctactcaagctttggttccctaaaaaacgcgcatcaaagccacaaaataaaatctgaattttttttctcttagagttgattctcaggtcgacgacaatttcttgagggcttccatgatttggacctggtacttccccctttcggagggcgagggagaaccctaagcttataaagaagaattcactcaattgtgtatgtttaaacacaaacatacgtcatccatgttgaaatataaaggtcggagcaagcagaagccagcttcccagtctcagatagaaagctcaaatgctcttgagagaagagtgaatagccggaaaaatgttgaaccaggtcactagcttagagatttgcatgaaccacactgggatgaaccatgttttggctgcttacgatgtggtgggttggggggtgactttcttggatatgaccaaatactatttctctttgtgtgtacctgtggaggttgcacaaaacaaagattatttactgctgtagaatgggttaattgagaaaagtggcatttccaatcagttgctgggtaaaacatggtaaatggaaactctctgtaccaaattttgtatattatttatttatttattatgcaacctgaaaaccgtaattattttctttatcagggaatggaacaaagttaattggtatgttatattagcatttcagggtgttgcattaagtgacaactcttatttcctgagagaatattctctccttcaccagccctcacataattaacccccaagccctctctttttcattcatatttttagaaattttgacattagatttttcggtggtgggactgaacctagctccttgtactttttatcacattagttgttgtattaaacctaattcctaattgaacatattctttgttttggggacattgaatactgtttcctcatttgcccttttcaagagctactcaatcttcattttgaaatagatagttttatgaataatgtccaggtatggttctgcttgacgctgaagggtacaacatagagggtccataataatctaccaaatattcaactttggaaattaattccttttgtttttcttaaatgatcaagggacatagagggcttcaaagaagttgtcctccctccagggcaaggggcaccatcgttccacaaggccaatagagcaagatagcataattcatgcaattcaagcatgttaaggcctcatttggatgaatggaagaagagcttacagacaaatccatttttggctacactcctttgtcagtcgagtttcgtagatcacactgtaggcccattttcagcaacctacacagctcggatgaggcaacatcctccatggaagttgttctaatgggtgtctattataacatatccaaaatgcagccccattggataactctggagttcgtcacccatcaaacatagaaccatgctcaggatgaagtttgtgtacgctgccaaatgagttagcaatttgtttcggccttaacttcttcctccgaccttggattggcccaaataacatgtggttggaaagctgacattctgatcttcaagatggaggtctcaaagtcatcatttgcttaagggaatcccaattcatgagcccttgaagttgcaggtcatgctgacctaagtatgagctaagtgtgctaggtcattatgacctaagcatgaggtgttattgattgtggggaaattaggtgaagcagattcattacttttaatcggagtggagttttacagtagccaaaagaaagaaaagaagatgaagtgggagctgcagcactaagtctaaagagaagaagaattgttttcaaattcaattgtgtgttaggtgaagtgggtgtagttggtgaactcaattgtataatctgaaaaacctaacctcaggcctat
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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