2024-03-29 13:34:58, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_004534530 2410 bp RNA linear INV 28-APR-2020 DEFINITION PREDICTED: Pecten maximus uncharacterized LOC117336074 (LOC117336074), ncRNA. ACCESSION XR_004534530 VERSION XR_004534530.1 DBLINK BioProject: PRJNA625562 KEYWORDS RefSeq. SOURCE Pecten maximus ORGANISM Pecten maximus Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Pecten. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_047024.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pecten maximus Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2410 /organism="Pecten maximus" /mol_type="transcribed RNA" /db_xref="taxon:6579" /chromosome="10" gene 1..2410 /gene="LOC117336074" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns" /db_xref="GeneID:117336074" ncRNA 1..2410 /ncRNA_class="lncRNA" /gene="LOC117336074" /product="uncharacterized LOC117336074" /db_xref="GeneID:117336074" ORIGIN
caaggcatacatgaacttttaattcagtcattttattgtcaatatataatagtaatatagcaatagtaattttgattagagacttaatccttgaaattatttacaatagcttagcttggtatgaatatattcattcacaacaaacagggtacagacggacctcaacactttttcatgacaagcaacatctagatgtacaataaagtgccaaaagtatttggtcattttatttttactatatatttcttgcattttttacaatttgtcaatgaatttttatgactttgtttatcaacagtttttttttaatttccaaacactagtagacaattgccattgccaagattttaaaaactgtaacatgcaatatctcttgaaatcaactacggaaaattatacaaatattatcataggaatgagcaaataattctctacatgtatgtgaagtttcaaataattccattgcaaagcgaagtaataaaatgaatatctgtcaaaatgcatgaaatatatagtgaaaatttaacgtgaccgaatacttttggcacgttactgtatataattgacatcagatttgatgttattaattggttcacgaccaacaagacattcgtcattttttcaagtccaattagacactagtctaacaacatgttcacatcaaataatacccaaacatgcatcttgttaacatgttcacaaccacaacataataattaatgtttgtatccatcaatacctgaacactggccttttgttcacatttaaaaagacatggatgcttgtaatttgtttacatcaaatatgttcacttaacatgagcactcacaacattcaacttaattcatgttcatgtattgctaaacttgttcattacatatctggactgaaagacttaaacatccacattgaacaataggcatgtacacttgttactgtaaactgaaacatctgccattaatttacttaaatatgtttgatactgttccctgttataaggccatactgttgtaaaagaacaggaaaaagcaaattcctggtgagtgccccacttaaatcaaacccagttttccaatgtgataatcgttggctctactaatcgagccaaagaagtagactccaccagctgagagatgtacactgtaccatatttactgtacaaggtcacatcgacctctgtcagctgagtgacttgactgtaacagtatttacaaggtcactttgacctgctctgtcagcttaatgacatcacatacttaacattatgtcaaaggtcacatcaacctctgtcagctgagtgacataccatatctaacactatatacaaggtcacaatgacctactctgtcagctgagtgacataccatatttaacactatatacaaggtcacatcataacattatgtactatcgacctgctctataagtgacagaattttttctaaaataacactgcacaaaagccacactgattcagtccatcagctctataacactttataatggttctttcatatacgtcagctatacaaaatgtatgtttaattgtaagattgtgtatatgtacagtatttctgtatcaagatttttttaacaaaaaacatgacaatcacacaataaaactgacaaaaccaaaaccataattaattttgccagtctttatattacatattcacatagagagtatattattatgttttaagatttactaagacagtcattatcactgtttcaaagtaaaatatccttcaattttagcaatagtctggttctgtcccacttgatctggatactttagaagcttgtaacaggcctttgttctgattgatcaagttagccatatatatagttactacaaagagacgacaaaataaccctgactgtctggcaataaacccagcaaacggtgatgaaaggattattattttaatattcagcaagattagtgaaactaagaacatgtttgatggtatatattggtgacacttgataatattgtaatcttgatgctataatttattctattatatcagaaaggaactacatatatatacacacattttatacatagtttgatgtcaaaactacactggaaggatatgtaaaaaaaaatattaataatagcaaaatgtgagtttttttacaaatagttatggcatcaagggctgaacctataagaattaaatgttggagaaatgttggaaattcgctaaaagttttattagaaatgagacttttgataattagggtaatttcatttacaggcgaaagtttttttgaaagtaatttgtgataattgtatactatattttgtaagtccctatacaggatagctttatgtttgttcgacagttcaaattgttaaacatgttggtcacattttaatctaaaataaattatccgtctggca
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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