2024-04-25 20:53:46, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_004028071 4231 bp RNA linear PRI 17-SEP-2019 DEFINITION PREDICTED: Nomascus leucogenys NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X4, misc_RNA. ACCESSION XR_004028071 VERSION XR_004028071.1 DBLINK BioProject: PRJNA564096 KEYWORDS RefSeq. SOURCE Nomascus leucogenys (northern white-cheeked gibbon) ORGANISM Nomascus leucogenys Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_044402.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Nomascus leucogenys Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4231 /organism="Nomascus leucogenys" /mol_type="transcribed RNA" /isolate="Asia" /bio_material="CORIELL:NLL605" /db_xref="taxon:61853" /chromosome="22a" /sex="female" /tissue_type="EB transformed lymphoblast cell line" /dev_stage="adult" gene 1..4231 /gene="NRDE2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 99 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:100595022" misc_RNA 1..4231 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X4" /db_xref="GeneID:100595022" ORIGIN
gctttgccctgcctctccctgccccgccgcgcccccggtccgttgacgactctcctctctgggccccgcccctcccgcttcggggtcaagacccagagagcgccgcgaaaaccacatttcccagagtgcaccgcgacggcaggggtcctcagaccggcgctcgctcgccggcgtcatctctataaagaagaacggcggtgcggcctgtggtcatggcgctgttcccagcctttgcggggcttagtgaggctcccgatggtgggagctccaggaaagagttagactggctgagcaacccaagcttttgtgttggatccataacgtccctgagccaacaaactgaagcagccccagcccatgtttctgaagggccaccgctgacgaggagtcatctgaaatcagagtcttcagatgaaagtgacactaacaaaaagctcaaacaaacaagcagaaaaaagaagaaagagaaaaagaaaaaaaggaagcatcagcatcataagaaaacaaagaggaagcatgggctgtcgagtagcagcaggtctgagacagacactgattctgaaaaggacaaaccttccagaggcgtcggaggcagtaaaaaggaatctgagaaaccgaatcaaggaaataatgctgcagctgatactggacatcgctttgtttggcttgaggacattcaggctgtgacgggagaaaccttcagaacagataagaaaccagatcctgcgaactgggagtacaagtctctctaccgaggggatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgcatatcttgggaagggacttccacagagaagaagcattcacgcaagcaggttgaacgctattttactaagaagagtgtgggattaatgaacattgatggagttgccattagcagtaaaactgaacctcccttatctgagcccgtctcctttataccagtgaaggacttggaagatgcggctcctgttacaacctggttgaatcctctggggatttatgatcagtcaaccacacagtggctacaaggacagggtcctccagagcaggaatcaaagcagccagacgcacagccagacagcgagagtgcggctctcaaggccaaggtggaggagtttaacaggagagtgcgggagaatcctcgggatacgcagctgtggatggcattcgttgcttttcaggacgaggtcatgaaaagtcctggcctgtatgccatcgaggaaggagagcaggaaaagcgaaagaggtccctgaaggtcattctggagaagaagctggccattctggagcgggccattgagagcaaccagagcagtgtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccactctggtcaaagagtggcagaaactgatatttttgcatcccaataatacagccctttggcagaaataccttttattttgccagagccagtttagtaccttttcgatatcaaaaattcacagcctttatggaaaatgcttgagcactttgtctgctgttaaggacggcagcatcttatctcaccctgcgttgcctggcacggaagaggccatgtttgcactctttcttcagcagtgccactttctgcggcaggccggccactctgagaaggccatctcattgttccaggccatggtggacttcaccttcttcaaacccgacagcgtgaaagatctgcctaccaaaggacaggtggaattctttgagcccttttgggacagtggagagccccgggctggggagaagggagcccgaggctggaaggcgtggatgcaccagcaggaacgaggtggctgggtggtcatcaacccagatgaggatgacgatgaaccagaagaggacgaccaggaaataaaagataagactctgcccaggtggcagatctggcttgctgctgagcgttcccgagatcagaggcactggcggccctggcgccctgataagaccaagaagcaaagtgaggaagactgtgaggatcccgagagacaggtgttgtttgatgatattgggcagtctttgatcagactttccagccacgatcttcagttccagctggtggaggccttcctgcagttcttgggtgtgccttctggctttactcctccagcctcctgtctttatctggccatggatgagaacagcatctttgataatgaactttatgatgaaaagcccttgacttttttcaacccttcattttctggggctagctgtgttggtcgcttggataggttaggctgtcctcgctggaccaggggtcagaaccgagagggcgaggagttcatccgcaatgtcttccaccttgtcatgcccttgttttcaggcaaagagaagtcccagctctgcttctcctggttacagtatgagattgcaaaggtcatttggtgcctgcacactaaaaacaagaagagattaaagtcacaagggaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaactgcaacaacttttgcctgtggaagcagtatgcacatctggagtggttgcttggcaacacggaggatgccagaaaagtttttgacacagcactcggcatggcaggaagcagagaactgaaagactctgacctctgtgagctcagtctgctctatgctgagctggaggtggagctgtcgccagaagtgagaggggccgccacagcccgagctgttcacatattaaccaagctgactgagagcagcccctatgggccctacactggacaggtgttggctgttcacattttgaaagcgcgaaaggcttacgagcacgcgctgcaggactgtttgggtgacagctgtgtctctgatccagctcccaccgattcctgtagccgcctaattagcctggctaaatgcttcatgctcttccagtatttgaccatagggattgatgctgctgtgcggatatacgaacaggtgtttgcaaaactgaacagttctgttttcccagaaggctctggcgagggggacagtgccagctcccagagttggaccagtgttctcgaagccatcacactgatgcacacaagcctgctgagattccacatgaaagtgagtgtttacccactggcccctctgcgagaggcactctcacaggctttaaagttgtatccgggcaaccaggttctttggaggtcctatgtacagattcagaataagtcccacagtgccagcaagaccaggagattttttgacacaatcaccaggtctgccaaacccttggagccttggttgtttgcaattgaagctgagaaactgaggaagagactggtggaaactgtccagaggttagacagtagagagatccatgccacaattcctgagaccggcttaatgcatcggatccaagccctgtttgaaaatgccctgtgcagcgacagtggcagccagtgccccttgctgtggaggatgtatttgaactttctggtttccttaggaaataaagaaagaagcaaaggtgtattctacaaagcacttcagaattgtccttgggcaaaggtgttgtacctggatgctgtggagtacttccccgatgagatgcaggagatcctggacctgatgactgagaaggagctccgggtgcgcctgccgctggaggagctggagctgctgctggaggattagagagcagcagggaaatgggctgtgcctgcgaggccaagttacccaccctgcggagctaggaggcgcgagcggagaacggaaacaaccctcaacttgaggaagttgagagctcgactccaaggtggacttgctccccctccccgagagctgactggcttgaactgtcatgagttcctggctgcccacaaagagggaccttctccacccttgtcctctgcgcggggcggacatcagccagatacatcacagacctgattgggggcagggagtaaggaagtccaggaccaaaccatgctccccatgacagcagctggtgcctcagtccccatctgactcatgtttcttctcatctggttcagaacttagaagggcgtggcctctgatcagctggttccctcaaaccccagtggcaacctgtcccttgagagccaggaatggctcttagcagtgggcagtgagccctcgagaggataaagcggctgctcgaacagattgcgagcacattacttgctgcatgggaagag
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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