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Previous release (v1)
2025-10-24 13:35:57, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_003912964 3740 bp RNA linear MAM 14-JUL-2019
DEFINITION PREDICTED: Suricata suricatta NRDE-2, necessary for RNA
interference, domain containing (NRDE2), transcript variant X4,
misc_RNA.
ACCESSION XR_003912964
VERSION XR_003912964.1
DBLINK BioProject: PRJNA553468
KEYWORDS RefSeq.
SOURCE Suricata suricatta (meerkat)
ORGANISM Suricata suricatta
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia;
Herpestidae; Suricata.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_043708.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Suricata suricatta Annotation
Release 100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3740
/organism="Suricata suricatta"
/mol_type="transcribed RNA"
/isolate="VVHF042"
/db_xref="taxon:37032"
/chromosome="9"
/geo_loc_name="South Africa: Kalahari Meerkat Project"
/lat_lon="26.98 S 21.83 E"
/collection_date="02-Feb-2016"
gene 1..3740
/gene="NRDE2"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 7 samples with support for all annotated
introns"
/db_xref="GeneID:115301093"
misc_RNA 1..3740
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X4"
/db_xref="GeneID:115301093"
ORIGIN
gtgcaccgcaaccgcgaaggcctcattaccggcgtccgctcgcgggcgccatttctgtaggggggaacggcagtgcggcctgtggccatggcgctgttcccggcctttgcaggcattggtgaggcttcccatagcggcagcgccaggaaagagttagactggctgagcaacccaagcttctgcgccggagccgcagcctctctgagccggcagggcggaggcgccacggccctgctctccgaggggtcaccgccgaccaggagccctctgaagtcagagccttcggatgaaagtgacgctaacaaaaagcccaaacaagcaagcagaaaaaagaagaaagagaaaaagaagaaaaggaagcatcaccacaagaaaaccaagagaaaacatggccagtccagtagcagtgggtctgagccggatagtgattctgaaaaggacaagacttccagaagccttcgagacagtaagaaggaatcagagaaaccaaaccaggaaggggctgctgccgccgacactgggcaccgcttggtctggcttgaggacgtccaggccctcacgggggagaccttccggacagataagaaaccggatcctgcaaactgggagtataagtctctctaccgaggagacatagcaagatacaagaggaaaggagactcctgcctcggccttaaccctaagaagcagtgtatatcctgggagggggccgccaccgagaagaagcattcacacaagcacgtggagcgctattttacgaagaagagcgtgggactgatgagcgttgacggagtcgccatttgtggtaaaaccgaacctccctcatctgagccggtctcgtttatcccggtgaagggctcggatgagggggctcctcctgtgacgacctggttgaaccctctggggatttacgatcagtccaccacgcagtggttacaagggcaaggtcctccagagcaagaatcaaagcagctggactcccagacagacaaagagagtgccctgctcaaggccaaggtggaggactttaaccggagagtccgggagaacccccgggatattcagctgtggatggccttcgttgcttttcaggacgaggtcatgaagagccctggcctgtacgccatcgaggaaggagagcaggacaggcggaggcggtccctgcggctcgtgctggagaagaagctggccgtcctggagcgggccatcgagagcaaccagagcagcgtggacctgaagctcgccaggctggtgctctgctccgagttctgggagccctccgcgctggccaaagagtggcagaagctcatcttcctgcaccccaacaacacggcgctttggcagaaatacctgttattttgccagagccagtttagcacctttaccgtctcaaaaattcacagtctctatggaaagtgcctgagcaccctgtctgccgtgaaggacggcagcatcctgtcgcaccccgccttgccgggcactgaagaggccatgtttgctctgtttctccagcattgccacttcctgcggcaggccggtcactcggagaaggcgatctctcttttccaggccatggtcgacttcaccttcttcaaacccgacagcgtgaaagacctgcccaccaaaggacaggtggaattctttgagcccttctgggacagcggggagccccgggctggggagaagggcgcccgaggctggagagcgtggatgcaccagcaggagcgcggcggctgggtggtcatcagtccagatgacgacgatgatgaaccagaagatgaggaccaggaaataagggataagtctctgccgcggtggcagatctggcttgccgccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaagaagcaaaccgaggaagactgtgaggacccagagagacaggtgctgtttgatgacatcgcacagtccctaatccgtctctccagccaggatcttcagtttgggctggttgcggcctttctgcagttcctgggcgtgccttctggcctcagccctcccgcctcctgcctctacctggccatggatgagaacagcatcttcgataacggacttcacgatgaaatgccactgacttttctcaacctttccttctccggcgtcagctgtgttggccgctcggacccgctgggctgccggcgctggacgcggggtcacagccgggagggcgaggagttcatccgcaacatcttccacctcgtgatgcctttgttttcaggccgggagaggtctgagctctgcttctcctggttacggtacgagatcgcgaaggtcatttggtgtctgcacactaaaaacaagaagaggctaaagtcacaaggaaagaactgcaagaaactagccaaaaatctccttaaggagcccgaaaaccgcaacaacttctgcctctggaggcagtatgctcatctggagtggttgcttggcaacacggaggatgccaggaaggtgttcgatgcggcgctcagcatggcggggggcggcggcctgcaggaccgcgagctgtgtgagctcggcctcctgtacgccgggctggaggccgagctgccggccgggtcgaggggggccgccgcggcgcgagccgtgcacgtcctgaccaggctgaccgaccaggggccctacaggccctactccgggcaggtgctggccgttcacgtcttgaaggctcgcaaggcttacgagcacgtgctgcaggactgtttgggtgacagctgtgtccccgggccagctcccagcgactcctccccccgttggatcagcctggtgaaatgcttcatgctcttccagtatttgacggtggggatcgatgcagccgtgcgggtgtacgagcaggtatttgcaaaactgaagggctctgtcccccccgggggccgtggctcggaggacgggcccggcgcccagagcccaagcggcgcgctggaggccgttacgctgatgcacgccagcctgctcagattccacatgaaggtcagcccctaccccctggcccctctgcgacaggcgctctctgaggctctacagttgtacccgggcaaccaggtgctctggagggcgtacgtgcaggttcagagtaagtcccacacggccagtaagaccagaagattcttcgacgcagttaccaggtctaccaaactcttggagccttggttgtttgcgattgaggctgagcagatgaggaagaggctggtggaaagtgttcagaggtgagtccagacaccccgttcgtgtggcccccccgccctgccgggccgcagggctccagaagggagcatgggccggcgctggaggatgacctgtggaaagaggaatccgaggcttgcagatggcaacagcttgttaggggccttcgtggccgtcacgaggccatgctcgttgggatcctgaatgttgcttatggcctgtgggtggttggcggtcaggcttccagccatccgagctgtggtaaaagcatgttggccaaacgcccgagcctgaagtaggactctggactcagtcccgctcctccacttaccagctgtgtggccgtgggcaagtcacgtcacctctcacgggctccccttcggtaacggagtaagagcctccctcttagcgctgctcggaggggccccccagggtaggcggcagagaggtccgcgccaccatccccgagaccggcctggcgcatcgcatccaggccctgtttgaaaatgcgctgcgga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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