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2024-03-30 00:57:28, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_001858270            1719 bp    RNA     linear   VRT 13-NOV-2020
DEFINITION  PREDICTED: Pygocentrus nattereri vimentin like (viml), transcript
            variant X2, misc_RNA.
ACCESSION   XR_001858270
VERSION     XR_001858270.1
DBLINK      BioProject: PRJNA675604
KEYWORDS    RefSeq.
SOURCE      Pygocentrus nattereri (red-bellied piranha)
  ORGANISM  Pygocentrus nattereri
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Characiformes; Characoidei; Pygocentrus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051229.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pygocentrus nattereri Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Pygocentrus nattereri"
                     /mol_type="transcribed RNA"
                     /isolate="fPygNat1"
                     /db_xref="taxon:42514"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="liver"
                     /dev_stage="adult"
                     /country="Netherlands: Dejong Marinelife, Rotterdam"
                     /lat_lon="51.9244201 N 4.4777325 E"
                     /collection_date="21-Nov-2018"
                     /collected_by="Nidal Karagic"
     gene            1..1719
                     /gene="viml"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 47 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 7 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:108433078"
     misc_RNA        1..1719
                     /gene="viml"
                     /product="vimentin like, transcript variant X2"
                     /db_xref="GeneID:108433078"
ORIGIN      
aaagctggccgccttcactccgtctttccgagctctaagtgagtccagctgaggcagaagttgaggtttagagcttcagagggtcagacaggcagtagcatgtcccgaatctcctccaccatctcctcctaccggaggcgcttcggcgatgaccggagccgcgtgctctcctcctcgctgcggtcgcgcacgtcctccgccccggtgctgcacgcgatctctagcgcgagggcgcgcgcgtccaccctgtccctgtccgcgccggcgccggacttctctctgagcgacgccgtgaacgcggagttccgcgcgaaccgcacgaacgagcgcgcgcagctgcagtccctgaacgagcgcttcgcgagctacatcgagaaggtgcgcacggcagagcagcggaaccgcgcgctgagcgcagagctcgagcatctgcgccgcggacagggggcctcgcgcgccgcggagatctacgatgaggagctgcgcgcgctgcgcaggcaggtggatgagctgaccggagagaaggcgcgcgccgaggtggccagagataatctaatacaggacatcgagaggctccgagagaagcttcaggaggagattctacaaagagaagaggctgagaacagcatgcagtgcttcagacaggatgtggataatgcagcacttgcccgggtggacctggagcggaaagtggactctctgcaggatgagattacctttttgaagaagcttcatgaggaggaaatgacagaagtccaagctcaaatccagcagcagcatgcacaggtggatctagacatggccaagcctgacctgactgctgctctcagggacgtccggcagcagtatgagagcctggccaccaagaacatacaggagtctgaggagtggtacaagtctaagtttgctgatttgaccgaagttgccaacaggaataatgatgctctacgtgcagccaagcaggaggccaatgagtaccgccggcaggtgcaggctctcacctgtgacgtggatgccctcaaggggacaaatgagtctctggagcgtcagatgaaagagttggaggagaactttgccatggagtcctcaggttaccaggacaccatcagccgtctggaggaagacatccacagcatgaaggatgagatggcccgccacctgcgggagtaccaggatctgctcaatgtcaaaatggccctagacattgagattgccacctacaggaagctgctggaaggggaggagagcagaaaccatgctggagtccagacctatgattgaaagcacaacaaccaagaaggtgctcatcaagaccattgagaccagagatggccaggtgattaatgagtctacccagaaccatgaagatctagagtgaccagaaactggccccgctggacctcacacctcggtctgactcgcccagcaacacataatacaaagagcaccactcacgctccctatagacgcaaagaaacagctgctaccccttcgatgcgcataaatgactgctttccagtgccttttctgccagattaaggacttagatccactgtctaggtgttgaagttacagtaatagcaatagcggccctctgataagagccatttcagtatttacttaaatagatcagactggaactgctttaacaagcttttataagccaacagaacgttgtcagtaaatacttgcaccaataaagtctgtggaggatggaga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]