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2026-05-31 12:42:31, GGRNA.v2 : RefSeq release 233 (Jan, 2026)

LOCUS       XM_078572717            1586 bp    mRNA    linear   PLN 13-JAN-2026
DEFINITION  PREDICTED: Wolffia australiana testis- and ovary-specific PAZ
            domain protein (LOC144701040), mRNA.
ACCESSION   XM_078572717
VERSION     XM_078572717.1
DBLINK      BioProject: PRJNA1372256
KEYWORDS    RefSeq.
SOURCE      Wolffia australiana
  ORGANISM  Wolffia australiana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Araceae; Lemnoideae;
            Wolffia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_135837) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_029677425.1-RS_2025_12
            Annotation Pipeline         :: NCBI Eukaryotic Genome Annotation
                                           Pipeline (EGAP)
            Annotation Software Version :: 10.5
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/31/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Wolffia australiana"
                     /mol_type="mRNA"
                     /isolate="7733"
                     /db_xref="taxon:161112"
                     /chromosome="3"
                     /tissue_type="Whole plant"
                     /geo_loc_name="Australia: South Australia"
     gene            1..1586
                     /gene="LOC144701040"
                     /note="testis- and ovary-specific PAZ domain protein;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     29 samples with support for all annotated introns"
                     /db_xref="GeneID:144701040"
     CDS             349..912
                     /gene="LOC144701040"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain protein"
                     /protein_id="XP_078428843.1"
                     /db_xref="GeneID:144701040"
                     /translation="
MAVVSPVGNGGIVRQRHSQDYRQGDEDSDEDNCSKPPRELLPEQESSWTRVLEDVLWILSAVFVVYLGDWHSNLLRILFFDHRIKRGPLYLGLAGVILNVGLVFFTGLPARTSKKIELPPSSAPAVALAGIFSFSLISFSLWPIWSFLSIPLLITLLMASMAVWAYLPLRPLRLQAFAIHDDQILPV"
     polyA_site      1586
                     /gene="LOC144701040"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
ctgtccatgcttgcccgttcgttcaggggagtcggtcagagtagcggaggaagacgacgaagacgccgtcggcttcaattccttgattttttctgcttgaaagggttcttccgaagcgaagaatgctcgtcgctgacatctggatgtggaggaaagaagggagccaagatcgaatcgaccgggtcacgtatcggcgacgatttccgatttcttggcctcgacgatgttaaatccttgcagaagaggcttttcgaagaaaggaaagaaagggtgttcgatttcatccggaaatctgttgggttcatgttctgattttgcgttgattcgcgctttcgattgctggagggaatggcagtcgtatcgccggtgggtaacggcggaatcgtcaggcagcgtcacagccaggattatcgtcaaggcgatgaagattcggacgaagataactgttctaagccgcctcgcgagttgcttcctgagcaagaaagctcttggacacgcgttctagaggatgttctctggattttatcggccgtcttcgtcgtctatttgggggattggcactcgaatttgcttcgcattttatttttcgatcatcgaattaaacgggggccgttgtaccttggattggcgggcgttatcttgaatgtgggacttgtatttttcaccgggcttccagcgaggacatcgaagaagatcgagttgcctccatcctctgcaccagcggtggcccttgccggcatcttctcattttcactgatctcgttttcattgtggccaatctggagtttcttgagcattcctcttctgatcacattgctcatggcttccatggctgtctgggcttacctcccactccggcccctcaggctacaggcatttgcgattcatgatgatcagatcttgccagtgtaagtcgatcccatctgcgaaattgggctggcctgcatctagagaaaaatgttttcattcttgaggaaatttcctccatctgtccctctcccttgcttcatccatacagatgatgttgtcctaaaatcctcttgtttcatgttcttctgggtatctaacaacatgatgattcttgtgaatcatgcatgttgtgaggaaaaaatagtttgtatcatctgtatcatctttgtctgacatacacaaacttgtagcagataggtggctggcctgtagctaaagaaaaataccttcattcaatgatcatcatgtggaaggaatatgtcatatgtccctctcacttgctccttcccgacttaacctggctctttcctcttgattcatgagtttctgtgcatttaataaaatggtgattcattttagttgtgaatgttgtgatgacggaattgtttgtatcatctctatcacgtttgactgcgccaacatgatgatcgtttgaatcgtcgcggttgtcttattgcattagcagcccaggaaacttggatgtgttcaactttccactgttgtatatgtaatttcttgaagcgcgagatggatggcatgtaatgtagatattttgtcatttccgttatgtgtgagataaatggttattgatgttgattttcatttttcatctttca
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]