LOCUS       XM_072154220            1885 bp    mRNA    linear   VRT 14-MAR-2025
DEFINITION  PREDICTED: Engystomops pustulosus vimentin (VIM), mRNA.
ACCESSION   XM_072154220
VERSION     XM_072154220.1
DBLINK      BioProject: PRJNA1226277
KEYWORDS    RefSeq.
SOURCE      Engystomops pustulosus (Tungara frog)
  ORGANISM  Engystomops pustulosus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea;
            Leptodactylidae; Leiuperinae; Engystomops.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092415) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_040894005.1-RS_2025_03
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 03/12/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Engystomops pustulosus"
                     /mol_type="mRNA"
                     /db_xref="taxon:76066"
                     /chromosome="5"
     gene            1..1885
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 11 Proteins"
                     /db_xref="GeneID:140133695"
     CDS             87..1490
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_072010321.1"
                     /db_xref="GeneID:140133695"
                     /translation="

MSTKSSYKRLFGGNPRSSSSGSRYVTSSSRYTLGSAYRPGYSSGGGLTSRTVYTTSSSPGSYTKSSAVRLRSSLPPARVTDSVDFSLADAINLEFKANRTNEKAEMQELNDRFANFIDKVRFLEQQNRILLAELEQLKGKGTSRVGDLYEEELRDLRRQVDLLTNEKARVEVDRDNLSDDLQRVREKLQDEIMQKEEAESNLQSFRQDVDNASLARIDLERKLESLQEEIIFLKKIHDEEIRELQVQIQDQHVQIDMDVSKPDLTAALRDVRQQYENVASKNLQDAEEWYKSKFADLSEAANRNNEALRQAKQETNDYRRQIQALTCEVDAMKGSNESYERQMREMEENFALEAANYQDTINRLQEEIQNMKEEMARHLREYQELLNIKMALDIEIATYRKLLEGEESRITIPVHSSFSNMSLRETNLDSHPMESTHSKRTLLIKTVETRDGQVINESSQQHDDYED"

     misc_feature    99..386
                     /gene="VIM"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:461414"
     misc_feature    387..1313
                     /gene="VIM"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:459643"
     polyA_site      1885
                     /gene="VIM"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

tgccagctccctctcctgctgaagctctgactggggaccactgcagccctgcattgccatctcacacaaaggaatagcagcccaccatgagtaccaagtcttcatacaagaggctctttggggggaaccccagatctagctcctctggaagtcgctatgtcacctccagcagtaggtacaccctgggcagtgcctaccgccctggatacagcagtggtggtggtcttaccagcagaacagtctacaccacatcatcctccccaggttcctacaccaagtcatcagctgtcaggctgaggagcagccttcctccagccagggtgacagatagtgtagacttctccctggcagatgccatcaacttggagttcaaagccaacaggaccaatgagaaggctgagatgcaggagctcaatgacaggtttgccaacttcattgacaaagttcggttcctggagcagcagaacaggatccttctggctgaattggagcagctgaagggaaagggcacctccagggttggggacctgtatgaagaagaactgagggatctcaggaggcaagtggaccttctgactaatgaaaaagccagggtggaggtggacagagacaacctatcagacgacctgcagagagtcagagaaaagctacaagacgaaatcatgcagaaggaagaagctgagagcaatctgcagtcattccgacaggatgtggacaacgcctctctggcccgtatcgacctggaacgcaaactggaatctctccaagaagaaattattttcctgaagaagattcatgacgaggaaatccgtgaacttcaagtacaaatccaggaccaacatgtccagatcgacatggacgtctccaaaccagacctcacagccgctctgcgtgacgtccgccaacaatatgagaatgtcgcttccaagaatctgcaggacgctgaagaatggtacaagtccaagtttgccgacctgtcggaagctgctaaccgcaacaatgaagccttgcgtcaagctaagcaggaaacgaatgactaccgccgacagatccaggccctcacctgcgaggttgatgcaatgaaaggatctaacgagtcttatgaacgccaaatgcgggaaatggaggagaactttgcccttgaagctgctaattaccaggacactatcaaccgcctgcaagaggagatccagaacatgaaggaggagatggcccggcacctgcgcgagtatcaggaactgctcaacatcaagatggctctggatatcgaaatcgcaacttacagaaaactgctggaaggagaggagagcaggatcaccattccagtccactcctccttctctaacatgagcttgagagaaactaacctggactctcaccccatggaatccacccactccaaaagaactcttctgatcaagactgtggagaccagggatggtcaggttattaatgaaagctcccaacaacatgatgactacgaggactgaaacctgaacccgcccccgaggatccttgaccagcgacatcatattgtcccctgtgtttaaactttgaagaaatccagctttcaagtgccttttgctgttacttcaagagcgggaggatagactttctacaggagcggtggtaggcaacctgtagctcgccagcgcctgggcatgctgggacttgtagttcctcccttggctggggagctatagattgccatagagggggattagtctttggggttttgcagagtgatggcagtggtctagtttacacttcttactagcaatatctcgtgctgcaatactgtttttaaaaaaaaaaacattcccaagaaaagctttttacttccagacgacctgtcagtgctttaaataaatctctagaaatataa

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