LOCUS       XM_070065529            3640 bp    mRNA    linear   MAM 28-NOV-2024
DEFINITION  PREDICTED: Oryctolagus cuniculus NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X4,
            mRNA.
ACCESSION   XM_070065529
VERSION     XM_070065529.1
DBLINK      BioProject: PRJNA1178637
KEYWORDS    RefSeq.
SOURCE      Oryctolagus cuniculus (rabbit)
  ORGANISM  Oryctolagus cuniculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha;
            Leporidae; Oryctolagus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091451) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_964237555.1-RS_2024_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3640
                     /organism="Oryctolagus cuniculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:9986"
                     /chromosome="20"
     gene            1..3640
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 EST, 57 long SRA reads"
                     /db_xref="GeneID:100350352"
     CDS             650..3460
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2 isoform X4"
                     /protein_id="XP_069921630.1"
                     /db_xref="GeneID:100350352"
                     /translation="

MNIDGVAITSKTASPSAEPGPFIPVRDSDDVTAPVATWLNPLGVYDQSTTQWLQGQGPSEQESKQPDSQADRENAALKAKVEEFNRKVRENPWDTQLWMAFVAFQDEVMRCPGLYAIEDGEREKRKKSLRLLLEKKLAVLERAVESNPSSVELKLAKLQLCAEFWEPSALLKEWQKLIFLHPNNTALWQKYLLFCQSQFSTFSVSKIHNLYGKCLSTLSAVKDGSVLSHPALPGTEEAMFALFLQQCHFLRQAGHSEKAVSLFQAMIDFTFFKPDSVRDLPTKVQVEFFEPFWDSGEPRAGEKGARGWRAWMHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWRIWLAAERSRDHRHWRPWRPDKSKKQTEDDCEDPERQVLFDDVGQSLIRLCSPDLQFRLVEAFLQVLGVPSGFTPPASCLYLAMDENSIFDNGLYDEKPLTSLSPLFSGVSSVGRMDPLGCRRWTRGHGREGEDFIRNIFHLVMPLFSGKEKSQLCFSWLQYEIAKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNNFCLWKQYAHLEWLLGNTEDSRKVFDTALSLVGSRDLKDHELCELSLLYAQLEVETELSPDSTGSATARAVHVLTRLTESSPYAPYTGQVLAVHILKARKAYEHALQDSLSESCGPTPAPVPSVSCLISLVRCFMLFQYLTVGIDAAVRVYEQVFARLKECVFPEGSGLEDRAGSPSLSGVLEAVTLMHTTLLQFHMRVSVYPLAPLREALSEALQLYPGNQVLWRSYVQVQNKSHSASKTRRFFAAITRSAKPLEPWLFAIEAEKMRRRLVETVQRVGGGEVHCTIPETGLTHRITALFENALRRDDGSQCPLLWRMYLNFLVSLGNTDRSKGVFYRALQKCPWAKALYLDAVEYFPDAMQEVLDLMTEKELRVRLPLEELELLLEG"

     polyA_site      3640
                     /gene="NRDE2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ggcggaggcttcaaaccggcgcttggccgccgccgccatttctgtagaggggaacggcggagaaagctgcgttgatggcgctgttcccggcctttgcgggcgtgagtgaggcccccggtggtgggagctcccggaaaggagttctctgaaatcagaacctgcagatgaaagtgacaccgaccagaagctcatccaaacgagcagaaaaaagaagaaagagaggaagaagaagaggaagcatcagcatcacaggaagacaaagagaagacgcgggcagtctggcagcagcgagtctgcgccggacactgattctgccgaggacgggccctccaggggcagcaggagggcctccgagaaaccaggtccaggaagtaactctgctgccgagactggacgtcgccttgtttggcttgaggatgtccaggctgtgactggagaaaccttcagaacagataagaagcctgatcctgccaactgggagtataagtctctctaccgcggggatatagcaagatacaggaggaaaggagattcctgccttggcataaaccccaagaaacagtgtatttcttgggaaggggcttccacagaaaagaagcggacccgtaagcatgttgaacgctattttacaaagaagagtgtgggattgatgaacatcgatggcgtcgccattaccagtaaaactgcatctccctccgctgagccaggcccctttatcccagtgagggactcggacgatgtgactgctcctgttgcaacctggctgaatcctctaggggtttatgatcagtcaaccacacagtggttacaaggacagggtccttcagagcaagagtcaaagcagcctgactcacaggcagacagagagaatgctgctctcaaggccaaggtcgaggagtttaacaggaaagttcgggagaatccttgggatactcagctgtggatggcatttgttgcttttcaggatgaggtcatgcggtgtcctggcctatacgccatcgaggacggcgagcgggagaagcggaagaagtccctgaggctgctcctggagaagaagctggccgtcctggagcgggccgtcgagagcaacccgagcagcgtggagctgaagctcgccaagctgcagctgtgtgccgagttctgggagccctccgctctgctcaaagagtggcagaaactgatttttttacaccctaataatacagccctttggcagaaataccttttattttgccagagccagtttagcaccttctcagtatcaaagattcacaatctgtatggaaagtgcctgagtactttgtcggctgtgaaggacggcagcgtcttgtctcaccccgcgctgcctggcacggaagaggcgatgtttgcgctctttcttcagcagtgccactttctgcggcaggctggccactcggagaaggccgtctctttgttccaggccatgattgacttcactttcttcaaacccgacagcgtgagagatctgccgaccaaagtgcaggtggaattctttgagcccttctgggatagtggagagccccgggctggggagaagggagcccggggctggagagcgtggatgcaccagcaggagcgcggtggctgggtggtcatcaacccagatgaggatgatgatgagccggaagaggacgaccaggagataaaggataagactctgcccaggtggcgaatctggcttgctgctgagcgttcccgagaccacaggcattggcggccctggcgccctgataagagcaagaagcagacagaggacgactgtgaggatcctgagagacaggtgctgtttgatgacgttggacagtctctcatcagactctgcagtcccgatcttcagttccgactcgtcgaggcctttctgcaggtcctgggcgtgccttctggcttcacacctcccgcctcctgcctttacctggctatggacgagaatagcatctttgataatggactttatgatgaaaagcccttgacgtccctcagccctttgttttctggtgtcagcagcgttggccggatggacccgctgggctgtcggcggtggaccaggggtcacggtcgggagggcgaggacttcatccgcaacatcttccaccttgtgatgcctttgttttcaggcaaggaaaagtctcagctctgcttctcctggctgcagtacgagattgccaaggtcatttggtgtcttcacactaaaaataagaagagattaaaatcacaggggaaaaactgcaaaaaactagcaaagaatctccttaaggagccagaaaaccgcaacaacttttgcctctggaagcagtatgcgcatctggagtggttgcttggcaacaccgaggactccaggaaagttttcgatacggcgctcagcctggtgggaagcagagacctgaaggaccatgaactctgtgagcttagtctgctctatgcccaactggaggtggagacggagctgtcgccagactccacggggtccgccacggcccgagctgtccacgtattaacccgactgaccgagagcagtccctacgcgccctacacggggcaggtgttggctgtgcacattctgaaggcccggaaggcttacgagcacgcgctgcaggacagcctgagtgagagctgtggccccactccagcgcctgtcccttccgttagctgcctgatcagcttggtcaggtgctttatgctcttccagtatttgactgtagggattgacgctgctgtgcgggtgtatgagcaggtgtttgccagactgaaggagtgtgttttcccggaaggctctggcctggaggacagagcgggctccccgagtctgagcggagtcctcgaagcggtcaccctgatgcacacgactctgctgcagttccacatgagagtcagcgtttaccctctggctcctctgcgagaggcgctctcagaggctttacagctgtatcctggcaaccaggtcctttggaggtcatacgtgcaggtgcaaaataagtcccacagtgccagcaagactagaagattcttcgctgcaatcaccaggtctgccaaacccttggagccttggctgtttgcaattgaagctgagaagatgaggcgaaggctggtggagacggtccagagggtaggtggtggagaggtccactgcacgattcccgagactggcctgacgcaccggatcacggccctgttcgagaatgcgctgcggcgtgatgatggcagccagtgccccctactgtggaggatgtatttgaactttttggtctccctaggaaacacagacagaagtaaaggtgtgttctacagagcgcttcagaagtgcccgtgggcaaaggccttgtacctggacgctgtggagtacttccccgatgccatgcaggaggtgctggacctcatgaccgagaaggagctgcgcgtgcgcctgccgctggaggagctcgagctcctgctggagggttaggaccacggggggcggggccgggggtccagcctcagtcctgtgtgcctggggtggcagggcctcaggttttgggatgtgtaagcaatgcacagcctatgtttacatattatatatgtgactgtaagtatgtatgtgtggaagaaccaggcctgtgaccattaaacctgtcctggccgagga

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