2025-02-22 14:21:08, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_068636498 2028 bp mRNA linear PLN 23-SEP-2024 DEFINITION PREDICTED: Phaseolus vulgaris protein NETWORKED 4B-like (LOC137829649), transcript variant X1, mRNA. ACCESSION XM_068636498 VERSION XM_068636498.1 DBLINK BioProject: PRJNA240798 KEYWORDS RefSeq. SOURCE Phaseolus vulgaris ORGANISM Phaseolus vulgaris Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_023753) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_000499845.2-RS_2024_09 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 09/16/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2028 /organism="Phaseolus vulgaris" /mol_type="mRNA" /cultivar="G19833" /db_xref="taxon:3885" /chromosome="7" gene 1..2028 /gene="LOC137829649" /note="protein NETWORKED 4B-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 long SRA reads, 8 Proteins" /db_xref="GeneID:137829649" CDS 141..1874 /gene="LOC137829649" /codon_start=1 /product="protein NETWORKED 4B-like" /protein_id="XP_068492599.1" /db_xref="GeneID:137829649" /translation="
MMKNQPSQWWWLESHNNTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLVERYDQVTGIRQQKTGGSPFSPLKHHQPEKLMSFTDDNYDSYYESCDVEESGESEIDDPEQEEEEDTKFNNNAELEEVQFVAANDVMEIERLGEENKDHNDHNKQKYNIYEAVMLREEIEQLRKENRVQKDELNPKSIICGELLMLREEIGRLGKENRAEKDELNQKDIICGEAMMLREEIEQLGKENRVLKDEINQKSIICGEVMMLREEIEQLRKENRGQKDELNQKDIICGEAMLLREEIEQLGKENRVLKDELNQKSIICGEVMMLREEIEQLRKENREHKDELNQKDNICGEIMMLREEIEQLGKENGALKDELNQKYIICGEVMMLREEIQQLRKENRGQKDELDQIDINSEVTMSREEIEVYIKENRVKNDELKPKGNVCGEVVMLREEIERLRKDERAQKSTLCGEVMKLKQENSAQKDHLKKKDQEKIEVIRHLSLAIDMLKQENVKMRSFIAKESTNKWKNPFGFKNFMGSLSGQLFNGLTKNQPSLVAL"
polyA_site 2028 /gene="LOC137829649" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
cttgctctgcgtgaactctatttccatcataggcggtggtggcaagcatagcattaattcatctcagattttttctctttcttcttcttcttccatgctcttggtgttcgtgataacatagataactgaggagggctaaaatgatgaagaatcaaccgtcacagtggtggtggcttgagagccacaataacacaagacgatccccttggcttcaatccactctcacagagctaaatgagaagacaaaggcaatgttaaaactaattgaagaagatgcagattcctttgcccaacgtgcagagatgtattacaagaagagaccacagcttgtgagcatggttgaagatttctataggacacatcgatcattagttgagcggtatgatcaagtcactggaattcgtcagcagaagactggaggatcccccttttctccactcaagcatcatcaaccagagaagttgatgagttttactgatgacaattatgatagctattatgagagttgtgatgtggaggagtctggggaatctgaaattgacgatcctgagcaagaagaggaagaggatacaaaattcaataacaatgcagaactggaggaagttcagtttgtggctgcaaatgatgtgatggaaattgagagacttggtgaagagaacaaggatcataacgatcacaacaagcagaaatataacatttacgaagcagtgatgttgagggaagaaatagagcaactcagaaaagagaacagagttcagaaggatgaactcaacccgaaaagcatcatttgtggtgaattgttgatgctgagggaagaaataggacgactcggaaaggagaacagagcggagaaggatgaactcaaccagaaagatatcatttgtggtgaagcaatgatgttgagggaagaaatagaacaacttggtaaagagaacagagttctgaaggatgaaataaatcagaaaagtatcatttgtggtgaagtaatgatgttgagggaagaaatagagcaactcagaaaagagaatagagggcagaaggatgaactcaaccagaaagatatcatttgtggtgaagcaatgctgttgagggaagaaatagaacaactcggtaaggagaatagagttctgaaggatgaactaaatcagaaaagtatcatttgtggtgaagtaatgatgttgagggaagaaatagagcaactcagaaaagagaatagagaacataaggatgaactcaaccagaaagataacatttgcggtgaaataatgatgttgagggaagaaatagaacaattgggaaaagagaatggagcgctgaaggatgaactcaaccagaaatatatcatttgtggagaagtaatgatgttgagggaagaaatacaacaactcagaaaagagaatagagggcagaaggatgaactcgaccagatagatatcaatagtgaagtaacgatgtcgagggaagaaattgaagtatacataaaagagaatagagtcaagaatgatgaactcaagccgaaaggtaacgtttgtggtgaagtagtgatgttgagggaagaaatagaacgactcagaaaagatgaaagagcacaaaaaagtaccctttgtggtgaagtgatgaagttaaagcaagagaatagcgcacagaaggaccatctcaagaaaaaagaccaagagaaaatagaggtaataagacacctgagtttagctatagatatgctgaagcaggagaatgtaaagatgagaagcttcattgctaaggaatctaccaacaaatggaagaatccgtttggatttaagaatttcatgggatcattatcggggcagttgtttaatggacttacaaagaatcaacctagtcttgtagctctctagataaggttcacagagtaaatagctaagttttgtagaacaatattagaagagacctatgtacatgtcatggggacttgctcgagtaacctacagatcttgtatacagtttagtatattcctaacaaatccgagtctctagtggatttcctttgca
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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