LOCUS       XM_068571269            2793 bp    mRNA    linear   VRT 19-SEP-2024
DEFINITION  PREDICTED: Clinocottus analis vimentin like (viml), mRNA.
ACCESSION   XM_068571269
VERSION     XM_068571269.1
DBLINK      BioProject: PRJNA1162142
KEYWORDS    RefSeq.
SOURCE      Clinocottus analis (woolly sculpin)
  ORGANISM  Clinocottus analis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales;
            Cottidae; Clinocottus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_027175832) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_023055335.1-RS_2024_09
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 09/18/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2793
                     /organism="Clinocottus analis"
                     /mol_type="mRNA"
                     /isolate="CAN_PGR_092001"
                     /db_xref="taxon:304258"
                     /chromosome="Unknown"
                     /tissue_type="fin"
                     /dev_stage="adult"
                     /lat_lon="36.635559 N 121.926191 W"
                     /collection_date="2020-09-17"
                     /collected_by="Daniel Wright"
     gene            1..2793
                     /gene="viml"
                     /note="vimentin like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 25 Proteins"
                     /db_xref="GeneID:137782142"
     CDS             27..1448
                     /gene="viml"
                     /codon_start=1
                     /product="vimentin like"
                     /protein_id="XP_068427370.1"
                     /db_xref="GeneID:137782142"
                     /translation="

MQSGQEQHRAIVRNDTSKMSFKVGSQSSYRKMFGGERVVPRASYSTRQFSSPVRSSRVSYGLSSAPAVYATKTQRLRSSAAMPRLASENLDFSLSDAVNSEFMTNRTNEKVQMQSLNDRFANYIDKVRFLEQQNKILLAELEQLRGKGTSRVGDLYEDEMRELRRQVDQLTNEKARVEVYRDNLAEDIDRLREKLQDEMSQREEAEGTMQNFRQDVDNAALARLDLERKVESLQDEIIFLKKLHDEEMLELQNQIQQQQHVHVDMEMAKPDLTAALRDVRQQYESLASKNLQESEEWYKSKFADLTEAAARHNDALRVAKQEANDYRRQVQSLTCEVDALKGTNESMERQMREMEENFSLETGGYQDSIGRLEEDIHNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEENRITTPLTNFSSLNLRETMLDSKPHFEATTTRKVLIKTIETRDGQVINESTQNHDDME"

     polyA_site      2793
                     /gene="viml"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

aacgccttcctaggcgcactccgctgatgcagtcgggacaagagcagcaccgagctattgtgagaaacgacaccagcaagatgtcttttaaagtaggctcgcagtcttcctacaggaagatgttcggcggggagagagtcgttcccagggccagttactccacgcgccagttctccagcccggtgcgctcgtcccgggtgtcctacgggctctcctccgcgcccgccgtgtacgcgaccaagacccaaaggctccggagcagcgcagccatgccccggctggcctccgagaacctggacttctccctgtccgacgccgtgaacagcgagttcatgacgaaccgcaccaacgagaaagtgcagatgcagtcgctcaacgaccgcttcgccaactacatcgacaaagtccgcttcttggagcagcagaacaagatcctgctggcggagctggagcagctgcggggcaaaggcacgtcccgggtcggagatctgtacgaggacgagatgcgggagctgaggcgccaggtggaccagctcaccaacgagaaggcccgggtggaggtttaccgggataacctggcagaagacatcgacaggctgagagagaagttgcaggatgagatgtcccagcgggaggaggctgagggcaccatgcaaaatttcagacaggatgtggacaatgctgccctcgccagactggacctggaacggaaggttgagtccctccaggacgaaatcatcttcctcaagaagctgcacgatgaggaaatgctggagctgcagaaccagatccagcagcaacagcatgtgcatgtggacatggagatggctaaaccggacctgacagctgctctgagagatgtccgtcagcagtatgagagcctggcctccaaaaacctccaggagtctgaggaatggtacaaatccaagtttgctgacctcaccgaagctgcagccaggcataatgatgctctgagagtggccaagcaagaggccaatgactacagacgccaagttcagtcccttacttgtgaggtggatgcccttaaaggaactaatgagtccatggagcgccagatgagggagatggaggagaacttctccctggagacgggcggttaccaggacagcatcggccgcctagaggaggacattcacaacatgaaggacgagatggctcgtcatctcagggagtaccaggacctcctgaatgtcaagatggccctggacattgagattgccacctacaggaagcttctggaaggagaggagaacagaatcaccaccccactgacaaacttctcatctctgaacctgagagaaacaatgcttgattccaaaccccattttgaagctacaacaactaggaaggttctaatcaagaccattgagaccagggacggtcaggtgatcaacgagtcaacccagaaccacgatgacatggagtaataatatctatgtctttgccaaacaatcaacaaaagcaatatgaagaaacctatttcaccagggctacaagcaagcaaacaaacgatcacaaaacgcaaaccgcttcaaaaagtgccttcatatgtgatgatccagtaagcctgctcgttgacagactgtattttgcttccttctctgttgaaagtattatcttttgttacattcgtttagacacagtaatgaaatcaccacaacatagaaatccttattgaggtctacaagaatctttatttgtaaccaaagtagtgtttttgatcaataaagcatgcacactccaggaaatctgtatgctaaagatgtcacaattgcctatacgcagcaataaaccagtaagaccgtaactcaatattgtgcattacgtggaatgctttgctggtattgctgggaatacttttatggtaatgaaatagaagtagcaaaacaatgcctcagatgaataaatagtgaaaatgggcaatttttcaagtaataacatccatatgtgtcttacaaccttaattttgtttcacactgatgtaagagtattacctgaatcgtccgtgtcaagaatcaaaactgatttggagactaaattgccccggctgccagttgcagacagtcttttctggtcaggccaccccgactcaggcgttgctctgctcatccaggttgacaacgctccaaaactgcaactgtaatagaatccaaacagtgacacctggagtacgggagtaggagggtcgtcgcagcacaatctcctggttcacactgttatatcgaaaaacatttccatacatgtgagaacaaagtattaaaaacgagtacagaatgatacaattcaatgcaatcactaatggtgctctaaaagttaaatttccaaagttaaatctttcaacagaacaagctacataaataaactttgtttttttgcaggacggttgtatttgacaatatgtttatctaaaaaaaactagtgggcagtgtcacactggggtttatattttattaaagatagcttagacttggtggatccataagcatcccaggtatagcagccttgactgtcttcctaaaaaggagtcaagtcatacagagtagatagaagtaacagttgaacttttgcacaaatatattctggattaattacagcaactaaatggagcttgagatgagataatttgtcaactgctgtttccaatgttaagggtgaagtttgaaactcaactttaaagccaacgtgtgttcttttaaactgaacttgaggtaggattgtgacacaatgttaagtaactatcaaactgtaataagcataaacaatcatctgaca

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