LOCUS       XM_062987321            1940 bp    mRNA    linear   VRT 10-FEB-2024
DEFINITION  PREDICTED: Trichomycterus rosablanca vimentin like (viml), mRNA.
ACCESSION   XM_062987321
VERSION     XM_062987321.1
DBLINK      BioProject: PRJNA1074370
KEYWORDS    RefSeq.
SOURCE      Trichomycterus rosablanca
  ORGANISM  Trichomycterus rosablanca
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
            Trichomycteridae; Trichomycterus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086012) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030014385.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/08/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Trichomycterus rosablanca"
                     /mol_type="mRNA"
                     /isolate="fTriRos1"
                     /db_xref="taxon:2290929"
                     /chromosome="25"
                     /sex="male"
                     /tissue_type="heart, liver, muscle"
                     /dev_stage="adult"
                     /geo_loc_name="Colombia: Andes Mountains, Santander"
                     /lat_lon="6 N 73 W"
                     /collection_date="2021-06-26"
                     /collected_by="Mauricio Torres"
     gene            1..1940
                     /gene="viml"
                     /note="vimentin like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 30 Proteins"
                     /db_xref="GeneID:134302277"
     CDS             1..1200
                     /gene="viml"
                     /codon_start=1
                     /product="vimentin like"
                     /protein_id="XP_062843391.1"
                     /db_xref="GeneID:134302277"
                     /translation="

MSTISSTTISSYRKRFGSERNAGRSSNRHSSPVGNRVQFSAPAALYPSSKSARVYGVAQTGCASLDVPLTEPVNAECVELDAFKVARSGEKAQAQSLNDRLVEQQNKALRAELEHWRGKSSSRLHDLHKHELNELRRRVDQLTNEKARAEVHRDNLLVDMERVRGKLQEEVLHREKAESNMQSFRQDVDNTALTRVNLERKVETLQEEMALLKKLHAEEMAELQAQVRQQQMLVNLDMTKPDLTSALREVRLQYENLSTKNIHKSEEWYKSKFTELAEAAKINDEAQQTARKEASEYRRQVQALTCEMDALKGRNESLERQIREMEENFAVASSGYQGTIRCLEEEIRSMKDEMAQHLREYQELLGIKMALDIEVATYRKLLEGDESRKLMSQKNEDVK"

     polyA_site      1940
                     /gene="viml"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

atgtcgaccatctcctccaccaccatctcttcctacagaaagcgtttcggtagcgaacggaacgccggcagatcctccaaccgccactcgagtcctgtcggtaaccgcgtgcagttcagcgcacctgcggctctctacccatccagcaagagcgcgcgggtttacggtgtggcgcagaccgggtgcgcaagcttagatgtccccctgaccgagcccgttaatgcggagtgtgtggagctcgacgcgtttaaagtcgcgcgctcaggtgagaaggcgcaggcgcagtccctgaacgaccggctcgtggagcagcagaacaaggcgctgcgcgcggagctggaacactggcgggggaaaagcagctcgcgccttcatgacctgcacaagcacgagctgaacgagctccggcggcgcgtggaccagcttaccaatgagaaagcgcgcgcggaggtgcaccgggacaacctgctcgtggacatggagcgcgtccgcggcaagctgcaggaggaggttctccacagagaaaaagccgagagcaacatgcagagcttccgacaggatgtggataacaccgctttgactcgggtaaacctggaaaggaaggtggagaccttgcaggaggaaatggcccttctgaagaagcttcatgctgaggagatggccgagctgcaggcacaggtcaggcagcagcagatgctcgtgaatttggacatgaccaaacctgacctaacttcagctctgagagaagtgcggctgcagtacgagaatctttccaccaagaacatccacaagtctgaggagtggtacaagtctaagttcacagaactagcagaggctgctaagatcaacgatgaagcccagcaaacggctcggaaggaggctagtgagtaccggcgccaggttcaggctctgacctgtgagatggacgccctcaaggggagaaacgagtctctggagcgacagatcagagagatggaggagaactttgctgtggcatcttcagggtatcaggggaccatacgctgtctggaggaggaaatccgcagcatgaaggatgagatggcacagcacctgagagagtaccaggagctgctcggcatcaagatggcactggacatcgaggttgccacctacaggaaactgctggaaggggatgagagcaggaaattaatgtctcagaaaaatgaagacgtgaagtgacctgcgtcattcccagtcggattcacacctcggccaaactcgcccagcaacacacagaaccaacaacaccatccatccccacgagacctacagatatagctgctgcccctcgatggacatctttccatagtcttttccgccatgttaatgacatacactgcctttaaaaagtattcagacctctgtagtggtttgtaccttagtgcaattgtgcaaatgagcaaatgagtcacgagataaaacaagaggtttttttcattgaaacttttggattttttgttgtactattaaagttaagaagggctgctttacttatttaatattagagagttttaaatactagtgaactattaatgatatgaatatagacaaatgcaaatactttgataacttgggctttgattacttgatgtttatgaatgataaatacataatcacttactacttggaaactgtaaatatgcttagggcattattaccagtagtcatattccaatattgaaaaaatactgctacagtagaattttacaggatgtgtatggggtgtacgtgataagtgagtcaattgcattgtatgcaaaaacccagttttagaagaaatctatgttaacaatgggaccttccactgttctacaaggtcaccaaagagaatatataagggtgtttattttttcctgtgttatcgcatctctgtgtgatccttttctgcagacaagattaaaactcttttctactcacaa

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