LOCUS       XM_062713707            2941 bp    mRNA    linear   INV 05-FEB-2024
DEFINITION  PREDICTED: Saccostrea cucullata DNA repair protein RAD51 homolog
            4-like (LOC134231744), mRNA.
ACCESSION   XM_062713707
VERSION     XM_062713707.1
DBLINK      BioProject: PRJNA1071555
KEYWORDS    RefSeq.
SOURCE      Saccostrea cuccullata (small rock oyster)
  ORGANISM  Saccostrea cuccullata
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae;
            Saccostrea.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026931197) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_032062105.1-RS_2024_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/31/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2941
                     /organism="Saccostrea cuccullata"
                     /mol_type="mRNA"
                     /isolate="Sc308-1"
                     /db_xref="taxon:36930"
                     /chromosome="Unknown"
                     /tissue_type="Abductor muscle"
                     /geo_loc_name="Australia: WA, Karratha"
                     /collection_date="2022-03-29"
     gene            1..2941
                     /gene="LOC134231744"
                     /note="DNA repair protein RAD51 homolog 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:134231744"
     CDS             28..966
                     /gene="LOC134231744"
                     /codon_start=1
                     /product="DNA repair protein RAD51 homolog 4-like"
                     /protein_id="XP_062569691.1"
                     /db_xref="GeneID:134231744"
                     /translation="

MSAIRKNLCSHITEDVAGKLKSAGIKTVVDFVRMDMEHIAQETTIPYKDLVVIRRLLLAQFSTFPVNCADFYQTAIASSSIIPTPVNKLNELLEGGLYSSEITEVAGEISSGKTQFCLSCCVSAVSTAKQNIVYIDTCGGFSADRLAGIAEAQYGEEQLEHILQSVKVVEAHDIFQLISALETVKENMIKKDDPFYDLVKLIIVDSVTAVIYPSLGGQQMDGHGLMVQLSLKIKRLAADFSLAVLIVNNVTGDGKVSLGKTWSHVPHNRLLLSLARDQKPNVREVVLVKSSKSATGGKIMLEITEKGTEDIK"

     misc_feature    310..897
                     /gene="LOC134231744"
                     /note="RAD51D recombinase; Region: Rad51D; cd19489"
                     /db_xref="CDD:410897"
     misc_feature    order(355..372,439..441,640..642,772..774,847..849)
                     /gene="LOC134231744"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:410897"
ORIGIN      

aaaactaatttggcgccaaaaaacaaaatgtctgccattcgcaagaatctatgttcgcacataacagaagatgttgctggtaaacttaaatcagcaggtattaaaacagttgtggattttgtaaggatggacatggaacatattgctcaagagactacgataccgtataaggatcttgtagtcatcagaagacttctactggcccagttttctacattcccagtgaattgtgcggacttctatcagacagccattgcctcatcatctatcataccaacaccagttaataagttaaatgaattgctggaaggtggactgtactcgtcagaaattacagaagtagctggggaaatatcgtcaggtaaaacacagttttgcctgagttgctgtgtttccgcggtgagtacagcgaagcagaatattgtgtacattgacacgtgtggcgggttctctgcggacagacttgcaggaatcgctgaggctcagtacggagaggaacagttagagcatatcctgcagtcagtgaaagttgtggaggcacatgacatatttcaacttatttcagcattggaaacagttaaggaaaatatgattaaaaaggatgacccattttatgatctggtcaagctgatcattgtggacagtgttacagcagttatctacccctccctgggtggacagcagatggatggacacggtcttatggttcagctctctctgaaaatcaagcgtttggctgcagacttcagcttagctgtactgattgttaacaatgtaacaggggatggaaaagtcagcctgggtaagacttggtcacatgtcccccacaatagactgctcctctcacttgccagggaccagaaaccaaatgttagagaggtggtgttggtgaaaagttcaaagtcggcaacaggtgggaagatcatgttagaaattacagaaaaggggactgaagacattaaatgaacctctttttaacacactgcacctctgtgtgcatccttaagcaggacagttgtggatgccaagctgccagagtctcgcttcatcaatagatgtccaaagagcccaactatagtggagtttccctgcttttctaagacggaaagaaagagaggattgatttttcagcctccttatatggacagaattggtcaattatttccttgcaacacttacattatattgactgtactcttctttttggaagtgcttcattaagagatctgtcaatctcctcatacacatatattaacatttttagctcttctgagccaaaggctcaaagagctaatgctatggccatttgtgcggtgtgcgttaactttttagaatatgggccataactcaagaaccccttggccaatcagtaccaaatttgtcacagggtatccttggcccaagggctaccatttatactaaaataagggttgggaccctaaaacaaggggagataatcaggaaaacaaaactaaaagtactggttgctaaaaaatcttcttctccagaaccaccaggcagattttcaccaaacttacatacaaggatcaggatatgttgaagattaaaaattgttcaaggcatgaccctggggcaaagggcgtggtctcaaggtcacttcaaagttgacctaaatttacaattaataaaaacgtgtatatttttcttactataaggactagaatcatcaaatcttgtaagttgatgcatcttacgacttcacatcatgttaactcaaaagtaggtcacggtgacctactttttaaattttgcggggatttgttttcaaattgatttgaaggcatattttggacactttaaggcctatgatcatcaaactttgtcagttgatgcatcttgggtccttgaacaatgtcaacttaaaagtaggtcactgtgacctactttttgaactttatgacttatccttttaaaaacattaaatcccaatatttcagatactggaaggtttagaatcatcaaatcttgtactttgatgcatctagggaccttaaaacatatttataacaaagtagatcactgtgacctactttttgaattttgccgacatttgttttcaaattgtttaaaatgcatattttgattaccttcagacctacgatcatcaaatttggtcagtagatgcatcttgggtctttgaaaaatgttaaccaaaatgtaggtcacgatgacctactttcgacattttatggctatatttcagtatcttaggcatttattggcttagaatcatcaaactttgtgagtggatgcatatttagttttcggagagtgatgaccaaaaattaggtcatggtgacctacttttgacattttatggctttatttaagtatctccggtacttattggcttagaatcatcaaactttgtgagttgatgcatatttagttttcggagagtgacgaccaaaaagtaggtcatggtgaccttcttttgacattttgtgactttatttaagtatctccggtacttattggcttagaatcatcaaactttgtgagttgatgcatatttagttttcagagagtgacgaccaaaaagtaggtcatggtgacctacttttgacattttatggctttatttaagtatctgcggtacttattggcttagaatcatcaaactttgtgcgttgatgcatcttgggttttcggagagtgacgaccaaaaagtaggtcatagtgacctacttttgacattttgtggctataattaagtatctctggtacttattgacctaaaatcatcaaactttgtcagatgatgcatcttgggttttcggagaatgtcgaccaaaaagtaggtcacagtgacctacttttgaatatctcaggtacgtattagcttagaatcatcaaactttgtcagtttaggcaccttgggttttcggagaacgtcaaccaaaaagtaggtcactgtgac

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