LOCUS       XM_062520859            1948 bp    mRNA    linear   VRT 26-JAN-2024
DEFINITION  PREDICTED: Sardina pilchardus vimentin (vim), mRNA.
ACCESSION   XM_062520859
VERSION     XM_062520859.1
DBLINK      BioProject: PRJNA1066300
KEYWORDS    RefSeq.
SOURCE      Sardina pilchardus (sardine)
  ORGANISM  Sardina pilchardus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes;
            Clupeoidei; Clupeidae; Sardina.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_085012) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963854185.1-RS_2024_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/18/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Sardina pilchardus"
                     /mol_type="mRNA"
                     /db_xref="taxon:27697"
                     /chromosome="19"
     gene            1..1948
                     /gene="vim"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 71 Proteins"
                     /db_xref="GeneID:134065779"
     CDS             96..1466
                     /gene="vim"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_062376843.1"
                     /db_xref="GeneID:134065779"
                     /translation="

MSRSTVQSSYNRMFGRTEQRPSMTRSTYSSRQYSSPVRSSRTSYSVSSAPPSIFASKTTRLRSSAPMIKLSSDNVDFALSDAITADFKANRTNEKAEMQHLNDRFASYIDKVRFLEQQNKILIAELDQLRGKGMSRVGDLYEEEMRELRRQVDQLTNEKSRVELDRDNFGDDIQKLREKLQDEMLQREDAENNLQGFRQDVDNAALARLDLERKVESLQEEIIFLKKLHDEEMCDLQAQVQQQHVQIDMDVAKPDLTAALRDVRLQYESMASKNLQESEDWYKSKFADLSEAAARNSDAIRQAKQEANDYRRQVQALTCEVDALKGTNESLERQMRETEDSFSNEAAGYQDSIVRLEEDIRNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITTPLPNFSSFNLRESMMEVRPMMDTMHKKVLIKTIETRDGEVINESTQNHDDLE"

     polyA_site      1948
                     /gene="vim"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ctcacacagcatcagtcgcacggagagcaggtaggagggaagtctgcgtgataaaaacgagaagtagccttactcaagcactgaaggattacaaaatgtcaagatccacggtccagtcctcttacaataggatgttcggtaggaccgagcaacggccctccatgactcgctctacttactcaagtcgccagtactccagtccagtacgctcttcccggacatcctacagcgtgtcgtccgctccccctagcatcttcgccagcaagaccaccaggctccgcagcagtgcgcccatgatcaaactcagcagcgataatgtggactttgcgctctccgatgccatcacggcggacttcaaagcgaaccggactaatgaaaaggcagagatgcagcacctcaacgacaggtttgccagctacatcgataaagttcggttcttggagcagcagaacaagattctcatcgcagagttggaccagcttaggggcaaaggtatgtcccgcgtcggggacttgtatgaggaggagatgagggagctgcgacgtcaggtggaccagcttactaacgagaaatccagagtcgagttggaccgggacaactttggagatgacatccagaagctccgtgagaagctgcaggatgagatgctacagagagaagatgctgaaaacaacctccaaggcttcagacaggatgtggataatgctgccctggcccgtcttgacctggagaggaaggtggagtccctgcaagaggagatcatcttcctgaagaagcttcatgacgaggagatgtgtgaccttcaggctcaggtccagcagcagcatgtccagattgatatggatgtggccaagcccgacctgaccgctgcgctccgggacgtcagactgcagtacgagtcgatggccagcaagaacctccaggagtccgaggactggtacaaatccaaatttgcggacctgtctgaagcagctgctcgtaacagtgatgccatccggcaggcgaagcaggaagccaatgactatcgccgacaggtgcaggctctcacctgtgaggtcgatgccctgaaaggcacgaatgagtcactggaacgacagatgagggagacggaggacagtttctccaacgaggcagctggttaccaggacagcattgtccgcctggaggaggacatccgcaacatgaaggatgagatggcacggcacctgcgcgagtaccaggacctgcttaatgtcaaaatggcgctggacattgagatcgccacttacagaaaactgctggagggtgaagagagcagaatcaccactccattgcccaacttctcttcttttaacttgagagaatccatgatggaagtcagaccaatgatggacaccatgcataagaaggtgctgattaagactattgagaccagagatggagaagtgatcaatgagtcaacccagaaccacgatgacctggaatgagccacgtgtctcacctgtgatgaagacgaggaaggaaagtccgaatagggtcggggaggggagggttgcatgaggaggcagaacctgaggagaaatagagggatcaaggaacgtcaatacttgtgttgttcatgtggaagtttcacttaaaagtcaacaaaaaaagacaaaaaagaagaaaaaaaacagctttaaaagtgccttttttgacacgctataaagattggaccagtgttttgttagggtagagcaaagcaggcactctagggcagtgaaccaagcagctttaatgaatgttctcgtttaccacgcagtctctagtttaccctccacaagttaaggccacagcaatacttttgagaaacagtttgtttttttactgttaccatttaccaaaattctaaatgaatgaagcaaatgttttgtgtgcacaccacgactgtcagtgcttttaccagtcaataaacttttgaaaaaatcaa

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