LOCUS       XM_062507590            1779 bp    mRNA    linear   VRT 26-JAN-2024
DEFINITION  PREDICTED: Cinclus cinclus vimentin (VIM), mRNA.
ACCESSION   XM_062507590
VERSION     XM_062507590.1
DBLINK      BioProject: PRJNA1066473
KEYWORDS    RefSeq.
SOURCE      Cinclus cinclus
  ORGANISM  Cinclus cinclus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Passeriformes; Cinclidae; Cinclus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_085046) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963662255.1-RS_2024_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/19/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Cinclus cinclus"
                     /mol_type="mRNA"
                     /db_xref="taxon:127875"
                     /chromosome="1"
     gene            1..1779
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 44 Proteins"
                     /db_xref="GeneID:134052866"
     CDS             81..1460
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_062363574.1"
                     /db_xref="GeneID:134052866"
                     /translation="

MSISTKNSSYRRMFGGGSRPSTGTRYITSSSRYSLGSALRPSSARYVSASPGGMYATKTTSVRLRSSMPPMRLHDSVDFTLADAINTEFKANRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLADDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHDEEIRELQAQLQEQHIQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRINMPIPTFAALNLRETNIESQPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"

     polyA_site      1779
                     /gene="VIM"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

cgcggccaccgcccttcttcgccgcacacccaggtcgccccactccgctcccggattacaaagcccgagccgccgtcgcaatgagcatcagcacgaaaaactcgtcgtaccgccgcatgttcggcgggggcagccgccccagcaccggcacccggtacatcacgtccagcagccggtactcgctgggcagcgccctgcggcccagcagcgcccggtacgtgtccgcctcgcccggcggcatgtacgccactaagacgacgtcggtgcggctgcggagcagcatgccgcccatgcggctccacgactccgtggatttcaccctggccgacgccatcaacacggagttcaaggcgaaccgcaccaacgagaaggttgagctgcaggagcttaatgaccgcttcgccaactacatcgacaaggtgcgcttcctagagcagcagaacaagatcttgctggccgagctggagcagctcaagggcaagggcacgtcccgcctgggcgacctgtacgaggaggagatgcgggagctgcggcgacaggtggaccagctcaccaacgacaaggcacgcgtggaagtggagcgggacaacctcgccgacgacatcatgcggctgcgggagaagttgcaagaggagatgcttcaaagagaggaggctgagagtaccctgcagtccttcagacaggatgttgacaatgcctctctggcacgtcttgatcttgagcgcaaagttgagtccctgcaagaagagattgtcttcttgaagaagcttcatgatgaggaaatccgagaattgcaagcccaactccaggaacagcacatccagattgatatggatgtttctaagcctgatcttactgctgccctgcgtgacgttcgccagcagtatgaaagtgttgctgctaagaatcttcaggaggctgaagagtggtacaagtccaaatttgcagatctctctgaagctgctaacaggaacaatgatgccctgcgccaggccaagcaggaagcgaatgagtaccgcagacagatccagtctctcacctgcgaagtggatgctctcaagggaagcaatgagtccttggagcgccagatgcgtgaaatggaggagaattttgctgttgaagctgctaactaccaagacactattggccgtctgcaggatgagatccagaacatgaaggaagaaatggctcgccatctccgcgagtaccaggacctgctgaatgtaaagatggctcttgatattgagattgccacctacagaaaactgctggagggtgaagagagcaggattaacatgcctattccaacctttgctgctttgaacctgagagaaaccaacattgagtctcagccaatggttgacactcactcaaagagaacacttctaattaagaccgtcgaaactagagatggacaggttattaatgaaacttcccagcatcacgatgacttggagtaaagctgaagagaagatgcataaaaaggagaaattcttaccagcaagattgaaaaagtccatgtcttaaaggaagaaacagctttcaagtgcctttctgcagtttttccatgagcgcaagatgattatgctaggaaataggtcttagatcttgcaaactgactctccctaaaggattagagtttacaatggagtctagtttacaaatagcaatatcttgtgctgcaatactgtttttaagtatctgaattcaataaaactgctttttccagcacagtatgagcaacctgtcgctacttcaataaatctttggaaaatggct

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