LOCUS       XM_060782341            1820 bp    mRNA    linear   VRT 03-NOV-2023
DEFINITION  PREDICTED: Anolis sagrei ordinatus vimentin (VIM), mRNA.
ACCESSION   XM_060782341
VERSION     XM_060782341.1
DBLINK      BioProject: PRJNA1032142
KEYWORDS    RefSeq.
SOURCE      Anolis sagrei ordinatus
  ORGANISM  Anolis sagrei ordinatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata;
            Toxicofera; Iguania; Dactyloidae; Anolis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026847660) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_025583915.1-RS_2023_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/30/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Anolis sagrei ordinatus"
                     /mol_type="mRNA"
                     /isolate="Geneva1000"
                     /sub_species="ordinatus"
                     /specimen_voucher="MCZ R-198163"
                     /db_xref="taxon:2962859"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="liver, muscle"
                     /dev_stage="adult"
                     /geo_loc_name="Bahamas: Conception Bank"
     gene            1..1820
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 87 Proteins"
                     /db_xref="GeneID:132778888"
     CDS             102..1511
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_060638324.1"
                     /db_xref="GeneID:132778888"
                     /translation="

MSTTSSQRTSSYRRMFGGSGRSSLGGGGGGGGGTRYVSSSSTRYSLGSAIRPSSVRLVSSAPGGGIYASKSVRLRSSLPAMRHLGDAGVDFSLADAINTEFKANRTNEKAELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLSDDILRLREKLQDEMIQREEAENNLQSFRQDVDSASLARLDLERRVESLQEEVAFMKKLHDEEIRELQAQIQDQHIQIDMDVVKPDLTAALRDVRQQYENVASKNLQEAEDWYKSKFADLSEAANRNNDALRQAKQEANEYRRQIQTLTCEVDALKGTNESLERQMREMEDNFALEAANCQDTINRLQDEVHNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISVPIPTFASLNLRETNLESIPVDTHSKRTLLIKTVETRDGQVINETSHHDDLE"

     polyA_site      1820
                     /gene="VIM"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ggcccgcagcgcctttcttgccttgcgcacctgcggcagaagccttccacgccgtctcctcctcctcctccactccacacacttttgggattacaacaaccatgagcaccacgagcagccagcgcacctcgtcttaccgccgcatgttcgggggctccggccggtccagcctcgggggtggtggaggcggcggcggcggcacccgctatgtctcctcttcctcgacgcgctactccctgggcagcgccatccggcccagcagcgtgcgcctggtctcctcggcgcctggcggcgggatctacgcctccaagtcggtgcgcttgcggtccagcctgcccgcgatgcgccacttgggcgacgccggcgtggacttctccctggccgacgccatcaacacggagttcaaggccaaccgcaccaacgagaaggccgagctgcaggagctcaacgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctgctggcggagctggagcagctcaagggcaaaggcacctcccgcctgggagacctctacgaggaggagatgcgcgagctccgccgccaggtcgaccagctcaccaacgacaaggcgcgcgtggaagtggagcgggacaacctcagcgacgacatcctgcgcctccgggagaaacttcaagatgagatgattcagagagaagaagctgaaaacaatttgcagtctttcagacaggatgttgacagtgcctccttggcccgtctggatcttgaacgcagagttgaatccttgcaagaagaggtggctttcatgaagaaacttcatgatgaggaaatccgtgagctgcaggcccaaattcaggaccaacatatccagattgatatggatgttgtcaagcctgatctcactgctgccctgcgggatgtgcgccaacagtatgaaaatgtggcttccaagaaccttcaagaagctgaagactggtacaagtccaaatttgcagatctgtctgaagcagccaacaggaacaacgatgccctgcgccaggccaaacaagaagctaatgagtaccgcaggcaaatccagactctcacctgtgaagtggatgcactcaaaggaaccaatgaatctctggagcgtcaaatgcgcgagatggaggataactttgctcttgaagctgctaactgccaagacactattaatcgtctccaggacgaagttcataacatgaaggaagaaatggcccgccaccttcgcgagtaccaagacctgctgaatgtaaagatggctcttgatattgagattgccacttacaggaaactgctggagggagaagagagcagaatttctgtacctattccaacctttgcttccctgaacctgagagaaacaaaccttgagtccattcctgtggacactcactcaaagagaacactgcttatcaagactgttgaaactagagatggacaagttatcaatgaaacttctcaccacgatgatctggagtgaagagaggccagcccatcttgaaatcaaacccttaccagcaagactaaaaagagaaaccgctttcaagtgcctttctgcagtttttccaagagcgcaaggtggttatgctaggagaactaggtcttagatcttgcaaaactgactctctcttgaaggatttagacgagcttacaaaaaagggagtctagttaagataacaatatattgtgctgcaatactgttttttaagtttctgaattgaataaaatggcttttttcagcacagtatgagcaacccctcactgcttcaataaacatttgggaaatggc

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