2024-04-29 11:33:25, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_056123598 1026 bp mRNA linear MAM 09-OCT-2023 DEFINITION PREDICTED: Sorex fumeus claudin 19 (CLDN19), mRNA. ACCESSION XM_056123598 VERSION XM_056123598.1 DBLINK BioProject: PRJNA972655 KEYWORDS RefSeq. SOURCE Sorex fumeus (smoky shrew) ORGANISM Sorex fumeus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_026606104) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_029834395.1-RS_2023_10 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 10/04/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1026 /organism="Sorex fumeus" /mol_type="mRNA" /db_xref="taxon:62283" /chromosome="Unknown" gene 1..1026 /gene="CLDN19" /note="claudin 19; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:130032017" CDS 277..951 /gene="CLDN19" /codon_start=1 /product="claudin-19" /protein_id="XP_055979573.1" /db_xref="GeneID:130032017" /translation="
MANSGLQLLGYFLALGGWVGIIASTVLPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTGQVQCKLYDSLLALDGHIQSARALMVVAVLLGFVAMVLSVVGMKCTRVADSNPVAKGRVAISGGVLFFLAGLCTVTAVSWYATLVTQEFFNPTTPVNARYEFGPALFVGWASAGLAMLGGSFLCCSCPPPERASSIPQPYRPGPSTAAREPVVKLSASAKGPLGI"
misc_feature 286..822 /gene="CLDN19" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN
ccccagggcactgggaggcagtttctggaaccctgccctgcttaagggctactgtgggcgggcgctggctctccagcccctgggcctccccctgcattctagagccccggccgccgcctgagctgctggccgctgcctatccctctcggctctgacccctcattctaccccaccctgtccggtggctcctgtcctgccacctggccatgaccccagtccctccagcgaccctggttgggccctgagcccggggacgtccagtcacagccttgggccatggccaactcagggctccagctcctgggctacttcctggccctggggggctgggtgggcatcatcgccagcactgtgctcccgcagtggaagcagtcctcctacgcgggcgacgccatcatcacggccgtgggcctctacgaggggctgtggatgtcctgcgcctcccagagcaccgggcaggtgcagtgcaagctctatgactcgctgctggcgctggacggccacatccagtctgcccgcgcactgatggtggtggccgtgctcctgggctttgtggccatggtgctcagcgtcgtgggcatgaagtgcacgcgggtggcagacagcaaccctgttgccaagggtcgcgtggccatctcggggggtgtcctcttcttcctggcaggtctctgcactgtgacggccgtgtcgtggtacgccaccctggtaacccaggagttcttcaaccccaccacccctgtcaatgcccggtacgagttcggccccgccctgttcgtgggctgggcctcggctggcctggccatgctgggcggctccttcctctgctgctcctgcccgccgccggagcgagccagcagcatcccgcagccctaccggccagggccctccacggccgcccgagaaccagttgttaagttgtctgcctccgccaagggccccctggggatataatgtccaggtcccccacctggcagtgccctgctgcacctaggcagagagcctggcattctgaggagtgactgtcca
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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