ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2025-10-27 00:46:55, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_056029671 2181 bp mRNA linear INV 10-MAY-2023
DEFINITION PREDICTED: Biomphalaria glabrata protein starmaker-like
(LOC106060130), mRNA.
ACCESSION XM_056029671
VERSION XM_056029671.1
DBLINK BioProject: PRJNA962856
KEYWORDS RefSeq; includes ab initio.
SOURCE Biomphalaria glabrata
ORGANISM Biomphalaria glabrata
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda;
Heterobranchia; Euthyneura; Panpulmonata; Hygrophila; Lymnaeoidea;
Planorbidae; Biomphalaria.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_074715) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_947242115.1-RS_2023_05
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.1
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 05/01/2023
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 100% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..2181
/organism="Biomphalaria glabrata"
/mol_type="mRNA"
/db_xref="taxon:6526"
/chromosome="5"
gene 1..2181
/gene="LOC106060130"
/note="protein starmaker-like; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 5
Proteins"
/db_xref="GeneID:106060130"
CDS 1..2181
/gene="LOC106060130"
/codon_start=1
/product="protein starmaker-like"
/protein_id="XP_055885646.1"
/db_xref="GeneID:106060130"
/translation="
MAQRTPNILLLKEHQTFYGSKNTSHSKAQRPPDILWLKNTRHSITQRTPDILLLKEHQTFYGSKNTRHSITQRTPNILWLKEHQTFYGSKNTRHSMAQRTPDIKWLLIVRDSCRSLACRNPRPKGKIPLEPGELDKDEQELDKDKQELDKDEQELDKDEQELDKDELESDKDEQESDKDDQELDKDDQELDKDEQELDKDEQQLDKDEQELDKDELESDKDEKELDLDDQELDKDEQELDKDEQELDKDEQELDKDEQELDKDELESDKDEQESDKDEQESENDEQELDKDDQELDKDEQELDKDELELDKDELESDKDEQESDKDEQESDKDEQESDKDEQESDKDEQELDKDDQELDKDEQELDKDEQESDKDEQESDKDEQESDKDDQESDKDEQELDKDEQELDKDEQELDKDEQELDKDEQELDKDEQELDKDEQELDKDELESDKDEKELDLDDQELDKDEQELDKDEQELDKDELESDKDEQESDKDEQESDNDEQELDKDDQELDKDDQELDKDEQELDKDELESDKDELESDKDEQESDKDEQESDKDEQESDKDEQESDKDEQESDKDEQESDKDEQESDKDDQELDKDEQESDKDEQESDKDEQESDKDEQELDKDEQELDKDEQELDKDDQESDKDEQESDKDDQESDKDDQELDKDEQELDKDDQELDKDDQELDKDEQELDKDEQELDKDDQELDKDDQELDKSDKKLEEVD"
misc_feature <403..2178
/gene="LOC106060130"
/note="Midasin, AAA ATPase with vWA domain, involved in
ribosome maturation [Translation, ribosomal structure and
biogenesis]; Region: MDN1; COG5271"
/db_xref="CDD:444083"
ORIGIN
atggctcaaagaacaccaaacattctattactcaaagaacaccagacattctatggctcaaaaaacaccagtcattctaaggctcaaagaccaccagacattctatggctcaagaacaccagacattctattactcaaagaacaccagacattcttttgctcaaagaacatcagacattctatggctcaaagaacaccagacattctattactcaaagaacaccaaacattctatggctcaaagaacaccagacattctatggctcaaagaacaccagacattctatggctcaaagaacaccagacattaaatggcttttgatcgtaagggacagctgcagatctcttgcttgcagaaatccgagacccaaaggaaagattcctctagagccaggcgagttagacaaggatgagcaggagttagacaaggataagcaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagctggagtcagacaaggatgagcaggagtcagacaaggatgaccaggagttagacaaggatgaccaggagttagacaaggatgagcaggagttagacaaggatgagcagcagttagacaaggatgagcaggagttagacaaggatgagctggagtcagacaaggatgagaaggagttagacttggatgaccaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagctggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagaaaatgatgagcaggagttagacaaggatgaccaggagttagacaaggatgagcaggagttagacaaggatgagctggagttagacaaggatgagctggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagttagacaaggatgaccaggagttagacaaggatgagcaggagttagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgaccaggagtcagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagctggagtcagacaaggatgagaaggagttagacttggatgaccaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagctggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaatgatgagcaggagttagacaaggatgaccaggagttagacaaggatgaccaggagttagacaaggatgagcaggagttagacaaggatgagctggagtcagacaaggatgagctggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgaccaggagttagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagtcagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgaccaggagtcagacaaggatgagcaggagtcagacaaggatgaccaggagtcagacaaggatgaccaggagttagacaaggatgagcaggagttagacaaggatgaccaggagttagacaaggatgaccaggagttagacaaggatgagcaggagttagacaaggatgagcaggagttagacaaggatgaccaggagttagacaaggatgaccaggagttagacaagtctgacaagaagctagaagaggttgactag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]