LOCUS       XM_052942238            2877 bp    mRNA    linear   INV 13-JAN-2023
DEFINITION  PREDICTED: Mya arenaria uncharacterized LOC128230181
            (LOC128230181), transcript variant X1, mRNA.
ACCESSION   XM_052942238
VERSION     XM_052942238.1
DBLINK      BioProject: PRJNA918361
KEYWORDS    RefSeq.
SOURCE      Mya arenaria
  ORGANISM  Mya arenaria
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Heteroconchia; Euheterodonta; Imparidentia;
            Neoheterodontei; Myida; Myoidea; Myidae; Mya.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_069125) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_026914265.1-RS_2023_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Mya arenaria"
                     /mol_type="mRNA"
                     /isolate="MELC-2E11"
                     /db_xref="taxon:6604"
                     /chromosome="4"
                     /sex="female"
                     /tissue_type="Siphon/mantle"
                     /country="USA: Larrabe Cove, Machiasport, ME"
                     /collection_date="2018-06-01"
     gene            1..2877
                     /gene="LOC128230181"
                     /note="uncharacterized LOC128230181; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:128230181"
     CDS             86..697
                     /gene="LOC128230181"
                     /codon_start=1
                     /product="uncharacterized protein LOC128230181 isoform X1"
                     /protein_id="XP_052798198.1"
                     /db_xref="GeneID:128230181"
                     /translation="

MENLVYLPVEKIHLNDLYDWSIPVQRCKSTKVALSPVGSPASSPRKSGVKVDLENGKGTGSLVKTNEHDIALFRYKTTVFAVKEECPHAGGPLHLGEIEDLGDELLCVRCPWHGWRISLHDGHVTLPKGHNFQSTVVYPVKITQEGQISIGFRGLDSKYFKVDEILFVFKQCTEIFWSRRTICLIFMPPTQDNDKSQCKSIHI"

     misc_feature    272..538
                     /gene="LOC128230181"
                     /note="Rieske domain; a [2Fe-2S] cluster binding domain
                     commonly found in Rieske non-heme iron oxygenase (RO)
                     systems such as naphthalene and biphenyl dioxygenases, as
                     well as in plant/cyanobacterial chloroplast b6f and
                     mitochondrial cytochrome bc(1) complexes; Region: Rieske;
                     cl00938"
                     /db_xref="CDD:445190"
     misc_feature    order(341..343,347..352,413..415,419..424,428..430,
                     434..436)
                     /gene="LOC128230181"
                     /note="iron-sulfur cluster [ion binding]; other site"
                     /db_xref="CDD:239550"
     misc_feature    order(341..343,347..352,413..415,422..424,428..430)
                     /gene="LOC128230181"
                     /note="[2Fe-2S] cluster binding site [ion binding]; other
                     site"
                     /db_xref="CDD:239550"
     polyA_site      2877
                     /gene="LOC128230181"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ttggctgctagcttgctgtcagtcaaacatagcgggaaaaataattttgttttgccgtagggcaaaacttaaagaatgcctaaaaatggagaacttagtgtatcttcctgtagaaaagattcacttaaatgatttgtatgactggtccattcctgtacagagatgcaaatcaacaaaagttgcactttccccggtagggtcaccggcctcctccccacgcaagagcggagtcaaagtagatctggagaatggaaagggaactggctctcttgtaaagaccaatgaacatgacattgcactctttcgatataaaaccactgtgtttgcagtcaaagaggaatgcccgcatgcaggtggacctctccatcttggagagatagaagacctaggagatgagcttctgtgtgtccgctgtccctggcatggctggcggatcagtctgcacgatggacatgtcaccctgcctaaggggcacaactttcagtccacagttgtctacccagtcaagatcacgcaggaagggcaaatatcaattggctttcgaggactagattcaaaatatttcaaagttgatgagattttgtttgtatttaagcagtgtactgaaatcttttggagccggaggacaatttgtctgatatttatgccgcctactcaggacaatgataaatcacaatgcaaaagtattcatatatagggacttgatacagtgaatatttctcgtgtgagaggataaagcagtgagggtggcatggtgtatacaaaaccagttagtatccaatatatcctttgatttcacataacataatattgcttgtacaatattgcacaattacaagctacaataactttataatgcaatttttggtcagttatgtttaaaaacatattacagcaagcaatacacttttcagattcataccaaactcacacattggtacagcgggcatcaaaattaattattatgccccccttcgaagaaaaggggtaccggtatatattgctttgcacatgtcggtcggttggtaggtcggtcagttgggcatgaccagtagatgaccccgattgattataggggtcaaaggtcaaggtcacagtgacctttaatggtaaaatgattttaaagcttgtcaaagtgataactcaagaatgcctagacctatggtcatcaaactgcatatggaggctgggcctgaccagtagatgacctctattgatttgtgggatcatcgggtcaaaggtcaaggtcacagtgaccttgaatgataaaaggttgtccgagtgataactcgacaatgcctgaacccatggccctcaaacttgacatggaggcttagcctgaccagtagatgacccctattcattttaaggttcttcgggccaatggttaaggtcaaagtgacctttaatgatagaaggttgtcttagtgataactagacaatgcctgcaccaatggccctcaaacttgacttagaggttgggccgaggacccctctcgattttgggggtcatcaagtcaaaagtcaaggtcaccgtgaccttgaaggcaaacttaacaattccttgaccaatggtcatcaaacttgacatgaaggttggccctgactagtagatgacccctattgattttgggggtcatctggataaagttcaaggtcagagtgacgttttatgcgaaaaagtaaacaaacctcccagtggtatctcaacaatgcctgaacagtagatgacaccttttgatattaggaatcatagggtcaaaggtcatggtcacagtgaccttaaatgcgaaaatgttcttagagtgataacttgacaatgcctgcacctttggccctcaaacatgacttgggggttgggcctgacctgtagatgaccccttttatttaaggggtcatcaaaggtcaaggtcacactgaccttgaactctgaaagcttttctgtgtgataaactgacaatgcctgcacccatgaccctcaaacttgacatttaggttttgggtcaccagttgatgacgcctttggattttgaggtcaaaggtcatggtcataactcatattcatcattaaaattttgtcatatttacttattttctgctgctaagaggatccattttcatctgaaaatatcagtcatcatctgaacaggataaaacattttgaatggtcataatcttatgacaaatcagctatcatttcagcccatgcatatttcattcaattgtccatataatcctgacaacatggcgctcaggggggggggggggcataatgtttaacaaacatcccttgttatgcttgaaatagctagcagagatcttgcttgtttgtgggttggattccttaacataatgcttatgaaaattattgagtttgaaatacatttagaccagtctagggcctatgtaacgaaaaggttcaagtttcaagttggacacaaattagaatacatgtatgcaaatcttgactttttaataaaggatttaccaaattggtttatttttattttatatacaggtgcatattcattttaacattttaaaatggtctttgtttttcttacatctgactatttgtacattgtgtttgttgaaatggttagctatgaaacagttctgtaatgtggacatgttgcaatatatactgttttacttttatggtactattaacgatttttatcagctatctatagacgtttagttttatgtttttagtacgaatatatagggcttgttttaaaccatagtcagtattgctttactaagttttgtttaaaattaatattcagtgtattcacatacaaattgtcagtaatttgtttatttactgcataactgtaactgtattgttaagaaaaataaaatttccctattcga

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