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Previous release (v1)
2025-11-09 12:30:09, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_048275127 560 bp mRNA linear PLN 17-MAY-2022
DEFINITION PREDICTED: Rhodamnia argentea U-box domain-containing protein
7-like (LOC115752846), mRNA.
ACCESSION XM_048275127
VERSION XM_048275127.1
DBLINK BioProject: PRJNA836871
KEYWORDS RefSeq.
SOURCE Rhodamnia argentea
ORGANISM Rhodamnia argentea
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae;
Myrteae; Australasian group; Rhodamnia.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_063150) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Rhodamnia argentea Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 9.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..560
/organism="Rhodamnia argentea"
/mol_type="mRNA"
/isolate="NSW1041297"
/db_xref="taxon:178133"
/chromosome="1"
/tissue_type="leaf"
/dev_stage="Mature"
/geo_loc_name="Australia: New South Wales"
gene 1..560
/gene="LOC115752846"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments"
/db_xref="GeneID:115752846"
CDS 88..540
/gene="LOC115752846"
/codon_start=1
/product="U-box domain-containing protein 7-like"
/protein_id="XP_048131084.1"
/db_xref="GeneID:115752846"
/translation="
MIILAFTFFISHFSTSPCTFLHRSLLEAAVCSPCFFFLRNKELILAAGVVPLLQEMTSNHDSHPSATALYLNLSCLEDAKPVLGLSQAVPFLTQLLKDETAPQCKLDAIHALYNLSTYHDNIGYLPSAGIISGLQSLLADLVTKCGQKSQ"
ORIGIN
ttacttataacatgtttcaagagttgcttttttctttttgtataggagaaattaccatgctgttccttacatgctaaatggcacaacatgattattcttgccttcactttctttatctcccatttctccacctccccctgtactttcttgcatcgttctttgcttgaggcagcagtgtgttctccttgcttctttttcctcaggaacaaggagttgatattagctgccggagtcgttccgcttctccaggaaatgacatccaaccatgactctcatccatcagcaacggctctatatctgaatctttcctgccttgaagatgccaagcccgtactaggcttgagtcaggctgtaccctttcttacccagcttcttaaagatgaaactgcacctcagtgcaagcttgatgctattcacgccctttacaatctctccacctaccatgacaatattggatacctgccttcggcaggcattatcagtggccttcaatctcttcttgcagatctagtgaccaaatgtggacagaaaagtcaatagctgtccttatgaatttagat
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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