2024-10-23 02:06:06, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_046188949 618 bp mRNA linear PLN 28-JAN-2022 DEFINITION Fusarium redolens Nitroreductase-like protein (BKA55DRAFT_527765), partial mRNA. ACCESSION XM_046188949 VERSION XM_046188949.1 DBLINK BioProject: PRJNA801210 BioSample: SAMN05878234 KEYWORDS RefSeq. SOURCE Fusarium redolens ORGANISM Fusarium redolens Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium redolens species complex. REFERENCE 1 (bases 1 to 618) AUTHORS Mesny,F., Miyauchi,S., Thiergart,T., Pickel,B., Atanasova,L., Karlsson,M., Huettel,B., Barry,K.W., Haridas,S., Chen,C., Bauer,D., Andreopoulos,W., Pangilinan,J., LaButti,K., Riley,R., Lipzen,A., Clum,A., Drula,E., Henrissat,B., Kohler,A., Grigoriev,I.V., Martin,F.M. and Hacquard,S. TITLE Genetic determinants of endophytism in the Arabidopsis root mycobiome JOURNAL Nat Commun (2021) In press REFERENCE 2 (bases 1 to 618) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (28-JAN-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 618) AUTHORS Haridas,S., Mesny,F., Miyauchi,S., Thiergart,T., Pickel,B., Atanasova,L., Karlsson,M., Huttel,B., Barry,K.W., Chen,C., Bauer,D., Andreopoulos,W., Pangilinan,J., LaButti,K., Riley,R., Lipzen,A., Henrissat,B., Kohler,A., Grigoriev,I.V., Martin,F.M. and Hacquard,S. CONSRTM DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (05-APR-2021) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_025763690). ##Metadata-START## Organism Display Name :: Fusarium redolens MPI-CAGE-AT-0023 ##Metadata-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..618 /organism="Fusarium redolens" /mol_type="mRNA" /strain="MPI-CAGE-AT-0023" /db_xref="taxon:48865" /chromosome="Unknown" gene <1..>618 /locus_tag="BKA55DRAFT_527765" /db_xref="GeneID:70218903" CDS 1..618 /locus_tag="BKA55DRAFT_527765" /codon_start=1 /product="Nitroreductase-like protein" /protein_id="XP_046042304.1" /db_xref="GeneID:70218903" /db_xref="InterPro:IPR029479" /db_xref="JGIDB:Fusre1_527765" /translation="
MAAELSANLFLQFVKSRRTYYPLSKNLPISTSRIQEIVNEAVLHTPTSFNSQSNRLVVLHGTEHEKLWDITIDTLKPIVPAANWTVTSDKLALFKGAAGTILFFNDITTVEGLQAKFVPFADKFPLWASQSLGMLQFVLWTALEAEGLGANLQHYNPLIDEKVAEAWRVPANWKLNAQLVFGGKTSEATAKQFNPLEDCVKVFGA"
misc_feature 28..612 /locus_tag="BKA55DRAFT_527765" /note="Fatty acid repression mutant protein (predicted oxidoreductase) [General function prediction only]; Region: FMR2; COG3560" /db_xref="CDD:442781" ORIGIN
atggccgctgaactctccgccaatctcttcttgcagttcgtcaagagccgacgaacctactaccccctctcaaagaaccttcccatctccacctctcgcatccaggagattgttaacgaggctgtcctgcatacccccacatcctttaactcccagtctaaccgtctggtcgtcctccacggcaccgagcatgagaagctgtgggacatcactattgacaccctgaagcctatcgtgcccgctgcgaactggacggtcactagtgataagctcgccttattcaagggcgccgctggtaccatcctcttcttcaatgatatcaccaccgtcgagggcctacaggccaaattcgtccccttcgccgacaagttccccttgtgggctagccagagtcttggcatgctgcagtttgtcctctggactgccctcgaggctgagggtctcggtgctaacctccagcactacaaccctctgatcgacgagaaggtcgccgaggcttggagggtccccgctaactggaagcttaatgcccagcttgtctttggtggcaagactagcgaggctaccgctaaacagttcaatcctctcgaggactgtgttaaggtgtttggtgcttag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]