ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2025-11-09 16:02:44, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_046188949 618 bp mRNA linear PLN 28-JAN-2022
DEFINITION Fusarium redolens Nitroreductase-like protein (BKA55DRAFT_527765),
partial mRNA.
ACCESSION XM_046188949
VERSION XM_046188949.1
DBLINK BioProject: PRJNA801210
BioSample: SAMN05878234
KEYWORDS RefSeq.
SOURCE Fusarium redolens
ORGANISM Fusarium redolens
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae;
Fusarium; Fusarium redolens species complex.
REFERENCE 1 (bases 1 to 618)
AUTHORS Mesny,F., Miyauchi,S., Thiergart,T., Pickel,B., Atanasova,L.,
Karlsson,M., Huettel,B., Barry,K.W., Haridas,S., Chen,C., Bauer,D.,
Andreopoulos,W., Pangilinan,J., LaButti,K., Riley,R., Lipzen,A.,
Clum,A., Drula,E., Henrissat,B., Kohler,A., Grigoriev,I.V.,
Martin,F.M. and Hacquard,S.
TITLE Genetic determinants of endophytism in the Arabidopsis root
mycobiome
JOURNAL Nat Commun (2021) In press
REFERENCE 2 (bases 1 to 618)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-JAN-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 618)
AUTHORS Haridas,S., Mesny,F., Miyauchi,S., Thiergart,T., Pickel,B.,
Atanasova,L., Karlsson,M., Huttel,B., Barry,K.W., Chen,C.,
Bauer,D., Andreopoulos,W., Pangilinan,J., LaButti,K., Riley,R.,
Lipzen,A., Henrissat,B., Kohler,A., Grigoriev,I.V., Martin,F.M. and
Hacquard,S.
CONSRTM DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (05-APR-2021) DOE Joint Genome Institute, 2800 Mitchell
Drive, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_025763690).
##Metadata-START##
Organism Display Name :: Fusarium redolens MPI-CAGE-AT-0023
##Metadata-END##
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..618
/organism="Fusarium redolens"
/mol_type="mRNA"
/strain="MPI-CAGE-AT-0023"
/db_xref="taxon:48865"
/chromosome="Unknown"
gene <1..>618
/locus_tag="BKA55DRAFT_527765"
/db_xref="GeneID:70218903"
CDS 1..618
/locus_tag="BKA55DRAFT_527765"
/codon_start=1
/product="Nitroreductase-like protein"
/protein_id="XP_046042304.1"
/db_xref="GeneID:70218903"
/db_xref="InterPro:IPR029479"
/db_xref="JGIDB:Fusre1_527765"
/translation="
MAAELSANLFLQFVKSRRTYYPLSKNLPISTSRIQEIVNEAVLHTPTSFNSQSNRLVVLHGTEHEKLWDITIDTLKPIVPAANWTVTSDKLALFKGAAGTILFFNDITTVEGLQAKFVPFADKFPLWASQSLGMLQFVLWTALEAEGLGANLQHYNPLIDEKVAEAWRVPANWKLNAQLVFGGKTSEATAKQFNPLEDCVKVFGA"
misc_feature 28..612
/locus_tag="BKA55DRAFT_527765"
/note="Fatty acid repression mutant protein (predicted
oxidoreductase) [General function prediction only];
Region: FMR2; COG3560"
/db_xref="CDD:442781"
ORIGIN
atggccgctgaactctccgccaatctcttcttgcagttcgtcaagagccgacgaacctactaccccctctcaaagaaccttcccatctccacctctcgcatccaggagattgttaacgaggctgtcctgcatacccccacatcctttaactcccagtctaaccgtctggtcgtcctccacggcaccgagcatgagaagctgtgggacatcactattgacaccctgaagcctatcgtgcccgctgcgaactggacggtcactagtgataagctcgccttattcaagggcgccgctggtaccatcctcttcttcaatgatatcaccaccgtcgagggcctacaggccaaattcgtccccttcgccgacaagttccccttgtgggctagccagagtcttggcatgctgcagtttgtcctctggactgccctcgaggctgagggtctcggtgctaacctccagcactacaaccctctgatcgacgagaaggtcgccgaggcttggagggtccccgctaactggaagcttaatgcccagcttgtctttggtggcaagactagcgaggctaccgctaaacagttcaatcctctcgaggactgtgttaaggtgtttggtgcttag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]