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2024-03-28 22:01:49, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_041517971            1803 bp    mRNA    linear   INV 09-MAY-2021
DEFINITION  PREDICTED: Gigantopelta aegis uncharacterized LOC121386920
            (LOC121386920), transcript variant X2, mRNA.
ACCESSION   XM_041517971
VERSION     XM_041517971.1
DBLINK      BioProject: PRJNA727593
KEYWORDS    RefSeq.
SOURCE      Gigantopelta aegis
  ORGANISM  Gigantopelta aegis
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda;
            Neomphalina; Neomphaloidea; Peltospiridae; Gigantopelta.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_054710.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Gigantopelta aegis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Gigantopelta aegis"
                     /mol_type="mRNA"
                     /isolate="Gae_Host"
                     /isolation_source="hydrothermal vent"
                     /db_xref="taxon:1735272"
                     /chromosome="12"
                     /tissue_type="foot"
                     /country="Indian Ocean"
                     /collection_date="2019-04"
     gene            1..1803
                     /gene="LOC121386920"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:121386920"
     CDS             102..857
                     /gene="LOC121386920"
                     /codon_start=1
                     /product="uncharacterized protein LOC121386920 isoform X2"
                     /protein_id="XP_041373905.1"
                     /db_xref="GeneID:121386920"
                     /translation="
MDKTILFFLCLYWWSFYDPSLCQAVDTCKVIPVFYAYSSHAETLTDLDKGVETESFWCSTGEIHNSWMDLYPHLMVHFGEIKKTIVGLALKGAPPDKHTKYGFPSFQVYKYDDIGDFFDAIRANHGNSRIIKTFTGLTPEDIKNGQVKKHEFPYPVDVTRLKIYFKLRLGQKCVCTKIEFYQAPKYCGVPRKKENKCKNNKGGCEHQCVPKDHTFHCTCPSDKVLWVDGLHCVKKGIVLTYSLQIYIGDLV"
     misc_feature    204..641
                     /gene="LOC121386920"
                     /note="F5/8 type C domain; Region: F5_F8_type_C; cl23730"
                     /db_xref="CDD:451512"
     misc_feature    705..797
                     /gene="LOC121386920"
                     /note="Coagulation Factor Xa inhibitory site; Region:
                     FXa_inhibition; pfam14670"
                     /db_xref="CDD:434114"
ORIGIN      
aaacaaacgcggcaaaatttactagaaaggaaaaaagccaaacacctgcatttgagcagcacataggttaatacacatgcggccgatttcttttcattaagatggacaaaaccattttgttttttctgtgcctctattggtggtctttttatgatccttcactgtgtcaagcagtggatacatgtaaagttatccctgtattctatgcctattcatcacacgctgaaacactcactgacctggataagggagttgagactgagtcattctggtgtagtactggcgaaatacacaactcgtggatggacttgtatccccaccttatggttcactttggtgaaattaagaaaactattgtaggactagcgttaaagggagcaccaccagataaacacacgaagtatggattcccatctttccaggtttataaatatgacgatattggtgacttttttgatgccatcagagcaaatcatggaaatagtagaatcattaagacatttactggcctgacacctgaagacattaagaatggtcaagtgaaaaagcatgagtttccatatccagttgatgttacgagattgaagatttactttaaactaagacttgggcagaaatgtgtttgcacgaaaatagagttctatcaggcaccaaagtattgtggtgtaccacgtaagaaagaaaataaatgtaaaaataataaaggaggttgcgaacaccagtgtgtaccaaaagatcatacgttccactgcacatgtccttcggacaaagtactatgggttgatggattacattgtgtaaaaaaaggtattgtgttaacttatagccttcagatatatatcggtgacttggtttaaaaagaaacttaaaatatgcttaagaccataatgaaagtgatctcagtctacttcactctatactttgtcctcaataacctgaatgtaaccacagagtgttttacaaaatacagtaaacattccgaaagtgcccccaaacaatgattattttgacttaattgtagtactaataatctataacctagatacttgcaggaggtactctgttagttcaagactgtaaatcagggcagaagagagcaaatgggacagcttccctttacttggaggcacgttactatagaatatcgctctttgacgggttgtattatggtatggtgaacattgtctgtccgtatgtctgatcataaagtgttcatttccggagcatatcttttttaccaattcaaataaaatcttcaaacctaggatgtaagtacaacttgagaatgcagtgtgtagtgtaccataactaggtcactgtgacctacttttcatgcattactgcacattaaaggaaatcttcaaacctaggatgtaagtacaacttgggaatgcagtgtgtagtgtaccataactaggccgtcatgacctacttttcatgcattactgcacattaaaggaaatcttcaaacctaggatgtaagtacaacttgggaatgcagtgtgtagtgtaccataactaggtcactgtgacctacttttcatgcattactgcacattaaaggaaatcttcaaacctaggatgtaagtacaacttgagaatgcagtgtgtagtgtaccataactaggtcactgtgacctacttttcatgcattactgcacattaaaggaaatcttcaaacctaggatgtaagtacaacttgagaatgcagtgtgtagtgtaccataactaggtcactgtaacctacttttcatgcattactgcacattaaaggaaatcttcaaacctaggatgtaagtacaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]