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Previous release (v1)
2025-11-18 04:09:20, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_039022647 686 bp mRNA linear PLN 13-JAN-2021
DEFINITION PREDICTED: Benincasa hispida signal peptidase complex subunit
3B-like (LOC120070765), mRNA.
ACCESSION XM_039022647
VERSION XM_039022647.1
DBLINK BioProject: PRJNA691418
KEYWORDS RefSeq.
SOURCE Benincasa hispida (wax gourd)
ORGANISM Benincasa hispida
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae;
Benincaseae; Benincasa.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_052350.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Benincasa hispida Annotation Release
100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.5
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..686
/organism="Benincasa hispida"
/mol_type="mRNA"
/cultivar="B227"
/db_xref="taxon:102211"
/chromosome="2"
/tissue_type="young leaf"
/dev_stage="seedlings with two fully expanded leaves"
/geo_loc_name="China: Guangdong"
gene 1..686
/gene="LOC120070765"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 14 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 55 samples with support for all annotated
introns"
/db_xref="GeneID:120070765"
CDS 1..504
/gene="LOC120070765"
/codon_start=1
/product="signal peptidase complex subunit 3B-like"
/protein_id="XP_038878575.1"
/db_xref="GeneID:120070765"
/translation="
MHSFGYRANALVTFAVTILVIMCAMASFSDNFNSPSPTASVQVLNINWFQKQLHGNDEVSMTLNISVDLQSLFTWNTKQVFVFVAAEYETPKNSLNQISLWDGIIPSKDNAKFTIHTSNKYRFIDQGSNLRGKEFNLTLHWHVMPKTGKMFADKIVMSGYRLPEDYR"
misc_feature 1..492
/gene="LOC120070765"
/note="Signal peptidase subunit; Region: SPC22; pfam04573"
/db_xref="CDD:461357"
ORIGIN
atgcattcttttggttatcgagccaatgctttggtcactttcgccgtcaccattctcgtaattatgtgcgccatggcctctttctccgataacttcaactctccctctcccaccgccagtgttcaggtgttgaacatcaactggtttcagaagcagcttcatggaaatgacgaggtcagcatgaccttaaatatctcggtggacttgcagtcactatttacatggaacacaaagcaggtttttgtttttgtagctgctgagtatgaaactcctaagaattccttgaaccagatctcgctttgggatggtataataccttccaaagataatgccaaatttacgattcacacttcaaacaagtaccgtttcatcgatcagggaagcaatctcagaggtaaagaattcaacttgacgctgcattggcatgtaatgccaaaaaccggtaaaatgttcgctgataagatagtgatgtctgggtatcgcttaccggaggactatcgatgaagatgccttgatatggtatttaaaaacttacttttccatatatgagaatacagaaaattcagttcagctgagttagaaatttacagacaggagaaaagttgcatgtatgaaacaaatagaaagtgagttttgcttggagtttttgattcattcttctctcatttgcattttctctctcccta
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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