LOCUS       XM_037460349            1322 bp    mRNA    linear   VRT 26-JAN-2024
DEFINITION  PREDICTED: Pungitius pungitius vimentin-related 2 (vimr2), mRNA.
ACCESSION   XM_037460349
VERSION     XM_037460349.2
DBLINK      BioProject: PRJNA1062908
KEYWORDS    RefSeq.
SOURCE      Pungitius pungitius (ninespine stickleback)
  ORGANISM  Pungitius pungitius
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Cottioidei;
            Gasterosteales; Gasterosteidae; Pungitius.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_084901) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 26, 2024 this sequence version replaced XM_037460349.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_949316345.1-RS_2024_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/11/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Pungitius pungitius"
                     /mol_type="mRNA"
                     /db_xref="taxon:134920"
                     /chromosome="2"
     gene            1..1322
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:119210411"
     CDS             131..1282
                     /gene="vimr2"
                     /codon_start=1
                     /product="desmin"
                     /protein_id="XP_037316246.1"
                     /db_xref="GeneID:119210411"
                     /translation="

MAALRVSSYRKLFEDDGGLGTQCAGQYRASVRGAAVDECHCVQFDFVAAKALNKEGLQRFVQDRHIVAALNDRLVRLIQLAHCFEEENESLKSQIVDVEKKLNGRQGSASVSCAEADRSLDAAVERLRREKDDIQCDTENLQKELEHLMEEYEKAAQQKILLQQGQQDVAKDVDAVTAECLALREQVAIYEQQLANMEDQHTTAVQRLLGPAEGTTGSTAAITFCSPDITPALDVKEHYCQLAESLQYECGAPSSAVSRRGDGRQIEEGVAGGSAVKGASKMKDISEIKMLVSELQKALAELEQCNEELEDEVDMKAAAYMDEIAELECTIDEIRRQEADFQVQMKQQCEDYKELFSEKMARDMEITAYRSLLAEEEERLCNL"

     misc_feature    338..1267
                     /gene="vimr2"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:459643"
ORIGIN      

cgcggtatatttagtcagctcagtggcccgtgagagatccttcacctcagtgctgcattctcatcctttgtgaatataaaactcggcgctgcctgtagcgtcgtcaccctgtttggacccgtccaaagacatggccgcgctccgagtgtcgtcctaccgcaagctgtttgaggatgatggaggtttgggtacgcagtgtgcagggcagtaccgcgcctccgtaaggggtgcggccgttgacgagtgccactgcgtccagtttgactttgtagctgccaaggcactcaacaaggagggtctccagcgcttcgtccaggaccgccacatcgtggctgccctcaatgacagactggtccggcttatccaactggcccattgttttgaggaggagaatgagtctctgaaaagccagattgtcgacgtggaaaagaagctgaacggtcgacaggggtcggcgagcgtctcctgcgccgaggccgaccgcagcctggatgcagcggtggagcgactgcgcagggagaaggatgacattcagtgtgacaccgagaacctgcagaaggagctggaacatctgatggaagaatacgagaaggctgcacagcagaagatcctcctgcagcagggacaacaagatgtcgctaaggatgtcgatgctgtgacagcagagtgtttggctctgagggagcaagtggctatctacgagcagcagctggccaacatggaggaccaacacacaacggcggtgcagcgtctgctgggacccgccgaagggaccacggggtcaacggcagccattactttctgcagccctgacatcacgccggccctggatgtgaaggagcattactgccagctggctgagagcctccagtacgagtgcggcgctccctcctcggctgtgagtcgccgtggcgacggaagacaaatagaagagggcgtagctggagggtcggccgtcaaaggcgcgtcgaagatgaaggacatcagtgagataaagatgctggtttcggagctacaaaaggcgctcgctgagctcgagcagtgcaacgaggagctggaggacgaggtcgacatgaaggcggctgcatacatggacgagattgctgagttggagtgtaccatagatgaaattcggcggcaagaggccgacttccaagtgcagatgaagcagcagtgtgaagactacaaggagctgttcagtgagaagatggccagagacatggaaattactgcctacaggagtctgttggccgaagaggaggagaggctgtgcaacctgtgacgtgaggcccgaagagtccgacatggcaggcgcccccccc

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