ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2026-03-05 06:41:16, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_033639127 1849 bp mRNA linear VRT 16-DEC-2025
DEFINITION PREDICTED: Epinephelus lanceolatus uncharacterized LOC117264835
(LOC117264835), mRNA.
ACCESSION XM_033639127
VERSION XM_033639127.2
DBLINK BioProject: PRJNA1380471
KEYWORDS RefSeq.
SOURCE Epinephelus lanceolatus (giant grouper)
ORGANISM Epinephelus lanceolatus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae;
Epinephelinae; Epinephelini; Epinephelus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_135744) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On Dec 16, 2025 this sequence version replaced XM_033639127.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_041903045.1-RS_2025_12
Annotation Pipeline :: NCBI Eukaryotic Genome Annotation
Pipeline (EGAP)
Annotation Software Version :: 10.5
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 12/12/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1849
/organism="Epinephelus lanceolatus"
/mol_type="mRNA"
/isolate="andai-2023"
/db_xref="taxon:310571"
/chromosome="11"
/sex="female"
/tissue_type="fin"
/dev_stage="adult"
/geo_loc_name="China"
/collection_date="2023-12-20"
gene 1..1849
/gene="LOC117264835"
/note="uncharacterized LOC117264835; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 17
long SRA reads, 1 Protein, and 100% coverage of the
annotated genomic feature by RNAseq alignments, including
11 samples with support for all annotated introns"
/db_xref="GeneID:117264835"
CDS 247..663
/gene="LOC117264835"
/codon_start=1
/product="uncharacterized protein LOC117264835"
/protein_id="XP_033495018.1"
/db_xref="GeneID:117264835"
/translation="
MSNDNPPPYVPPVPGGPSAPGFSSAYSSQPATFPGSPYQTFPQTYTGGGDLSYYQGPAGPQGPPVPPGPYLTQPGYQGYQSGPWEGPKMYGEQPKHTVFVVDQNYDDGGADGAESCLAGCSAALCCCCLWDMLTQNFC"
polyA_site 1849
/gene="LOC117264835"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
tgcctcgcgcacactcatccattaatccatcggtcaacacgtcgatcaactggagcgacggcaacagagaaagttcatgttgtgacatttgacgcttcgtcctgagctgagagtccatccatccatccatccatccatccatccgtccatccatccatccatccatccatccatccatccgtccatccatccatccatccatccatccatccgtccatccgtccatccgtccgtccatctgtccccatgagtaatgataaccctcctccgtacgtccctcccgtccccggtggaccttcagctcccggcttctcttcagcttacagctctcagcctgcgacctttcctggctcaccataccagaccttccctcagacttacacaggtggaggagacctctcctactaccaaggaccggctggaccccaggggcccccggtgcccccggggccatacctgactcagcctgggtaccaggggtaccagagcggcccctgggagggccctaaaatgtacggagagcagccgaaacacacagtgttcgtggtcgatcaaaactatgacgacggcggcgctgacggagccgaatcgtgtctggcaggatgttcagctgctctgtgctgctgctgcctgtgggacatgttgacccaaaacttctgctgacctctgaccttcaccaccactgagcctcttctttcccatcatgcaccagggccaccataatgacaccaacctttgaccttttgaccttcattattttatcctgttagacatttgtgtcaagttcggtcagaattagtgaatgaatccttcagttatggccaaaaacacgtttgtgaggtcacagtgaccttggcttgtgtccaatctgacgtttgcgccaaattgaatagaaatcccatcaaagccgtcttgagtcacagggttcagaagaatgagacagacgtaaaggcacagtgacctttgaccttcaaattctaatcagctcattgttaagtccaagtgaaagtttgtgccatatttgaagaaattcccctgaggcattcttcagacatcgtgtcgacaaagatgagtcagacgaggtcacactgacctttttaccactaaagtctaatcagttcattgttcagtccaagtggacgttcatgccaaatttgaaaaaaaaacaaaaaaaaccttgaggtgttctcgagaggtcatgttagcgagaatgaaatggacgaggtcacggtgacctttaaagagataatcaccaaagtctaatcaggtcatcgtggagccccagtgaaagtttgtgccaaattaaaaaaaaaaatcccttaaggtttctgagatgtcgtgttcacatgttctcaagaatgagatggacaaagttacagtgacctttgaccttcaaaatctaatcagttcatcgttgactcaaagtggacgtttgtgccaaatttgaagaatttctcccgggatgttgttgacatatgatgttaaagagaacaggacagtgttcttacatagcggcggtggcggctcactgacattcatgataaatgttccagtgtttgagtcacagacgccgtcagtttcactaatgtgtttctctgttgtgtgtttttccccgacctcctgatgatgtcacacccctctgccaatgatgtgcctgcacatggcgggtcctgatctcagaccctgatgacatcataaaactatttttaatgaatcattgaatctgtttgaatttaggctaaaaacttgtttctaagtgtttacagtctcctcgtcttcacgtttcttgtgtgttaatgtttcttcacagttctgatgaagaggtcaataaaaagcttcgttaaaatga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]