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Previous release (v1)
2025-11-17 12:53:52, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_033393191 1954 bp mRNA linear INV 14-APR-2020
DEFINITION PREDICTED: Drosophila miranda trichohyalin-like (LOC108161194),
mRNA.
ACCESSION XM_033393191
VERSION XM_033393191.1
DBLINK BioProject: PRJNA623594
KEYWORDS RefSeq.
SOURCE Drosophila miranda
ORGANISM Drosophila miranda
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_046677.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila miranda Annotation
Release 102
Annotation Version :: 102
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1954
/organism="Drosophila miranda"
/mol_type="mRNA"
/strain="MSH22"
/db_xref="taxon:7229"
/chromosome="4"
/sex="male"
/tissue_type="Whole body"
gene 1..1954
/gene="LOC108161194"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments, including 21 samples
with support for all annotated introns"
/db_xref="GeneID:108161194"
CDS 58..1794
/gene="LOC108161194"
/codon_start=1
/product="trichohyalin-like"
/protein_id="XP_033249082.1"
/db_xref="GeneID:108161194"
/translation="
MLNIFIIVLVFFNLSENLTRGSDFHENQESCFVSRELEDQCAAVCYPTVKPLLKYMGICHQKDLQISGMQNQLQDQNEEVTKYKTQVEILNKQLVDKRSSSGLKNDLKETIDKVQNLRLELSEELKKLYRQKNNTVKDLHEEIANVKMQLKSKDELLEQNEKTMIEKDELLKQKEKNMEEKDELLKKKEKNMEEKDGLLKKKDSTLKNLQEEIANVKMQLTRKDELLKENEKTMTEKDELLKQKEKNMEEKDEILKHKDSPMKDLHEEIANVKIQLTRKDELLDQKEKTMIEKDELLKQMEKNMEEKDEMLKQKEKKMEENDELLKQKEKNMEEKDEMLKQKEKNMEEKDEMLKQKEKKMEENDELLKQKEKNRDEKDELLKKKDSTMKDLHEEIANVKIQLRSKDEFLEQKEQKKEQFIRPILDNADPKTSETHTIDVPLKEPDESGWTIILQELEGLASLEKKLAQYKEKPFNNGNDSFFIGRKNLYFMTLATPHEILIQVKFVDGRSSSVQDIRFKMGNAKKDYTLRSVNDNLPNRKYSITEMKALIAIQVLMKRKMPFSSRDWKQLTIKFREIQ"
misc_feature <391..1284
/gene="LOC108161194"
/note="chromosome segregation protein SMC, common
bacterial type; Region: SMC_prok_B; TIGR02168"
/db_xref="CDD:274008"
misc_feature 1345..>1647
/gene="LOC108161194"
/note="Fibrinogen-related domains (FReDs); C terminal
globular domain of fibrinogen. Fibrinogen is involved in
blood clotting, being activated by thrombin to assemble
into fibrin clots. The N-termini of 2 times 3 chains come
together to form a globular...; Region: FReD; cl00085"
/db_xref="CDD:412152"
misc_feature 1639..1641
/gene="LOC108161194"
/note="gamma-gamma dimer interface [polypeptide binding];
other site"
/db_xref="CDD:238040"
ORIGIN
gcgaattcagttggtattctgttgtgttcgagaaatatcaaggtatattcccagaatatgttgaatatttttattattgtgttggttttctttaatttgtcggagaatttgacacgtggttcagatttccatgaaaaccaagagtcgtgttttgtatcaagagaactggaagatcaatgcgctgccgtttgttatcccaccgtcaagccgttgcttaaatacatgggaatatgccatcagaaggatctacaaataagtggaatgcagaaccaacttcaagaccaaaatgaggaggttaccaaatacaaaactcaagtagaaattctcaataaacagttggtagataagcgaagttcttctggcctcaagaatgacctaaaagaaaccatcgataaggtgcagaacctcagattggagctcagtgaagagttgaaaaagttatacagacagaaaaacaataccgtgaaggatctgcacgaagaaatcgcgaatgtgaaaatgcagctgaagagcaaggatgaacttttagaacaaaacgagaaaacaatgatagaaaaggatgaactattaaaacaaaaggagaaaaatatggaagaaaaggatgaactattaaaaaagaaggagaaaaatatggaagaaaaggatggactactaaaaaagaaggatagtaccttgaagaatctgcaagaagaaatcgcgaatgtgaagatgcaactgacgagaaaggatgaacttttaaaagaaaacgagaaaacaatgacagaaaaggatgaactattaaaacaaaaggagaaaaatatggaagaaaaggatgaaatattaaaacataaggatagtcccatgaaggatctgcacgaagaaatcgcgaatgtgaagatacaactgacgagaaaggatgaacttttagaccaaaaggagaaaacaatgatagaaaaggatgaactattaaaacagatggagaaaaatatggaagaaaaggatgaaatgttaaaacaaaaagagaaaaagatggaagaaaacgatgaactattaaaacagaaggagaaaaatatggaagaaaaggatgaaatgttaaaacaaaaggagaaaaatatggaagaaaaggatgaaatgttaaaacaaaaggagaaaaagatggaagaaaacgatgaactattaaaacagaaggagaaaaatagggatgaaaaggatgaactattaaaaaagaaggatagtaccatgaaggatctgcacgaagaaatcgcgaatgtgaagatacaactgaggagcaaggatgaatttttagagcaaaaggagcaaaaaaaggagcagtttattaggccaattttggataatgcagacccaaaaaccagcgagactcatacaatcgatgttcctttgaaagaaccagacgaaagtggttggacaattattttgcaagaacttgagggattggctagtctagaaaagaagctagctcaatataaagaaaagccgttcaacaatggaaatgattcatttttcatcggccgcaagaatctgtatttcatgacactggccacgccacacgaaattcttatccaagtgaaatttgtggatggcagaagttcttcggttcaagacattcgcttcaaaatgggcaacgcaaaaaaagactacacactgaggtcggtcaatgataatttaccaaacagaaagtactccattaccgaaatgaaagcgcttatagcgattcaggttcttatgaaacgaaaaatgccattcagttctagggactggaagcaattgaccattaagttcagagagatccaataatagaagaagaaaccattatgcgcccttgatagagaagtatttttatgtatttaaatacatttttaaattcttcggtaatcgatgatgctaccgtgaactaacgtaaaaaaaaatagtttaaaaaataaaagttaatgctggtttttctgttattttctaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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