LOCUS       XM_033200186            2381 bp    mRNA    linear   PRI 28-MAR-2020
DEFINITION  PREDICTED: Trachypithecus francoisi retina and anterior neural fold
            homeobox 2 (RAX2), transcript variant X1, mRNA.
ACCESSION   XM_033200186
VERSION     XM_033200186.1
DBLINK      BioProject: PRJNA614514
KEYWORDS    RefSeq.
SOURCE      Trachypithecus francoisi (Francois's langur)
  ORGANISM  Trachypithecus francoisi
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Colobinae; Trachypithecus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_022681470.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Trachypithecus francoisi Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Trachypithecus francoisi"
                     /mol_type="mRNA"
                     /isolate="TF-2019V2"
                     /db_xref="taxon:54180"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="muscle"
     gene            1..2381
                     /gene="RAX2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 mRNAs, 6 Proteins, and 70%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:117076548"
     CDS             187..879
                     /gene="RAX2"
                     /codon_start=1
                     /product="retina and anterior neural fold homeobox protein
                     2 isoform X1"
                     /protein_id="XP_033056077.1"
                     /db_xref="GeneID:117076548"
                     /translation="

MPAPVDGTDLPGAGRQAWGSPALSLPVAPPAVSPPSVPLPSRQVGAMFLSPGEGPAAEGGSLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGTMAAPRLPEAPALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHAFGPTFADGFALEEASLRLLAKEHAQALDRAWPPA"

     misc_feature    order(406..420,424..426,475..477,493..495,532..534,
                     538..543,550..555,559..567,571..576)
                     /gene="RAX2"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(412..414,421..423,541..543,550..555,562..564)
                     /gene="RAX2"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    415..573
                     /gene="RAX2"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
ORIGIN      

ggcgccgggcccgctggggcaggtgccctgtggagattgacagaggggctgccgtgggcggccgtgacagccacagagaggggaagagaaaacagggacggtgacacacagagaaggaagaacagacagtggcccagcaggagacccccacaagcccgaggaggacagcccggggatgcagagcgcatgccggccccagtggatggaacagatctccccggagccgggaggcaagcctggggctcccctgccctgtccctgccggtagcccccccggccgtctccccgccatctgtcccgctgccgtctcgccaggtgggagccatgttcctgagcccgggcgaggggccggcggccgagggtgggagtctggggccgggcgaggaggcccccaagaagaagcaccggaggaaccgcaccaccttcaccacctaccagctgcaccagctggagcgggcattcgaggcctcccactacccagatgtatacagccgcgaggagctggcggccaaggtgcacctccctgaggtgcgcgtgcaggtgtggttccagaaccgccgggccaagtggcgtcgccaggagcggctggagtcaggctcgggtaccatggcagccccgagacttcccgaggccccagcgctgcccttcgcccgccccccggccatgtcgctgcccctggagccctggttgggacctggaccgccggccgtgccaggcctcccccgcctcctgggcccgggcccggggctgcaagcgtccttcgggcctcatgcctttggtcctaccttcgcagacggctttgccctggaggaggcgtccctgcgactgctggccaaggaacacgcacaggctctggacagggcctggccgccggcctgagcctgctgccctcctgggccccctcctcggtttgacccgagagctggagacgtgccctggtgacagccaccaagccttggcctaggctgaggtcatggagcaaccgtggtcaggccaggccaccaccactggggagcgggaccagagacaggctgctgggtcccccgcccccatcctgtcctctaccccatcgccacccgtcctgctggcagcggaccggcccccagtgtcaggcaggaggtgacccaagtattcctaggccggggacgggggccctcctcccctcctggggcctcagtctcccgtctgttaatggggtgtgggggcctctgaggttcccgggctgtgaggctgtgagtggcggggccgctgactctgtaagatgagtctacatctctctgccactcccactccccatcagcagagctgcccactctccaggctcccggtccccccgaaatgacagtaacagcagctcctgcgagcctggtctcctttcagggtgcacccaccatgtgagcgctcccctctccgttgcgccctggacctcgggcacagccgttagcccattctacagagagggaaacgggggctcaggcaggaagccaggtccccaaggccgcacggctaggagtgggtggagctgcctttcaggtccatcaccagccccaccatctgaggcagcaggttctggagggagggtggggccctcgtgtggaggtgggctggtgctggcggtgtcgtcgtcagcccctgttcctcgcgtccccctagaccccaggccccgtgcatgtcccccagccctgcggaggcacggccggcgtctgctctgtccgacacagttgcattgcccaagagctctaagcaaggaggctgtcgcagggccgagaacccgctgtgactggcaagcgtggctggcccagcgcagcaggaggggccctgagccatgggatgtgacagtcttgaccagggccaccccctgggacataagtgcggcaccagggcaggagctgcagtagctactctcctcgtctccagcccgggctctccaaatcactcccagatcactggggcaccccatctccaggcggcacctcacacaccagtcctgtggcccaacgcccagccaatgtcactgtgcaccaggcactggggacacggcagtaagcacaagaaagatttttttttctttttaacctaaaccaggccaggtgtggtggctcatgcctgtactcccagtgctttgggacgctgaggtgggaggattgcttgagaccagcctgggtgacatagcaagacccagtctccacaaacatttttaaaacgtgccaggtgtagtggtgcacacttgtcatcccagcaacccgagaagctgaggcaggaggatggcttgagcccagaaggttgaggctgcagggagctgtgatcacaccactgcattccagcctgtgcaacagagccagaccccgactcaaaacaaataaataaaacacaaacctaaa

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