2024-03-29 17:52:33, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_031995891 789 bp mRNA linear PLN 24-JAN-2020 DEFINITION Saprochaete ingens uncharacterized protein (SAPINGB_P001168), partial mRNA. ACCESSION XM_031995891 VERSION XM_031995891.1 DBLINK BioProject: PRJNA602436 BioSample: SAMEA5939090 Sequence Read Archive: ERR3509916, ERR3510534 KEYWORDS RefSeq. SOURCE Saprochaete ingens ORGANISM Saprochaete ingens Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Saprochaete. REFERENCE 1 (bases 1 to 789) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-JAN-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 2 AUTHORS Brejova,B. TITLE Direct Submission JOURNAL Submitted (15-SEP-2019) Comenius University, Faculty of Mathematics, Physics and Informatics, Computational Biology Group, Mlynska dolina, Bratislava 842 48, Slovakia COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_022474067). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..789 /organism="Saprochaete ingens" /mol_type="mRNA" /isolation_source="Isolated from a wine cellar in Western Cape Province (South Africa)" /db_xref="taxon:2606893" /chromosome="Unknown" /note="contig: contig1" gene <1..>789 /locus_tag="SAPINGB_P001168" /db_xref="GeneID:43579991" CDS 1..789 /locus_tag="SAPINGB_P001168" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_031851782.1" /db_xref="GeneID:43579991" /translation="
MTKFRGCIDIHNGVVKQIVGGTLDTGSLATNFVSEQPPAYYAQLYSSNKVAGTHVIKLGPGCDDAAAEALAAWPGQLQVGGGITAENAAAWLNEKHASKVIVTSYLFPDNKTLDRKRLEALFEAIGGDREKLIIDLSCRRRADTETGEPRWFVATNRWQTITEVEVNKETLDDLAKYCSEFLIHAADVEGLCRGIDEDLVRKLGEWTTIPTVYAGGAKSIDDLALVEKLSNGKVDLTYGSALDIFGGNKVKFDDCIAWNEKH"
misc_feature 4..780 /locus_tag="SAPINGB_P001168" /note="TIM-like beta/alpha barrel domains; Region: TIM; cl21457" /db_xref="CDD:451249" misc_feature order(25..27,160..162,409..411) /locus_tag="SAPINGB_P001168" /note="active site" /db_xref="CDD:240074" ORIGIN
atgaccaagttccgaggttgcatagatattcataacggtgttgtgaagcagattgttggtgggacactcgatactggttcccttgcaactaactttgtttccgaacaacctccagcctactacgcacagctgtactcgtcgaacaaggttgctggaactcacgtcatcaagctcggtccagggtgcgatgatgctgctgctgaggctcttgcggcatggcctggacaactacaagttggtggtgggattacagccgagaatgcggcagcatggcttaatgaaaaacacgcaagtaaggtcattgtgacctcgtacttattcccagacaacaaaacgttagaccgcaagcgactggaggctttgtttgaggctattggtggggaccgcgaaaagcttattattgatctaagttgtcggcgacgtgcagacactgagaccggcgagccacgatggtttgtagctactaaccggtggcagactatcaccgaggtcgaggtcaacaaggaaaccctagacgacctggccaagtactgttctgagtttctgattcatgccgcagatgtcgaaggtctatgtcggggaattgatgaagaccttgtacgcaagctgggtgaatggactacaattcctaccgtgtatgcaggtggggccaagagcattgatgatcttgcgcttgttgagaagctcagcaacggcaaagttgacttgacgtatggttctgcgcttgacatctttggcggtaacaaggttaagtttgatgactgcattgcctggaacgaaaagcattaa
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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