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Previous release (v1)
2025-12-13 09:12:11, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_031720185 963 bp mRNA linear PLN 27-NOV-2019
DEFINITION Blastomyces gilchristii SLH14081 RNA interference and silencing
protein (BDBG_01098), partial mRNA.
ACCESSION XM_031720185
VERSION XM_031720185.1
DBLINK BioProject: PRJNA41099
BioSample: SAMN02953742
KEYWORDS RefSeq.
SOURCE Blastomyces gilchristii SLH14081
ORGANISM Blastomyces gilchristii SLH14081
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae;
Blastomyces.
REFERENCE 1 (bases 1 to 963)
AUTHORS Champion,M., Cuomo,C., Ma,L.-J., Henn,M.R., Klein,B., Goldman,B.,
Young,S., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L.,
Berlin,A.M., Heiman,D.I., Hepburn,T.A., Saif,S., Shea,T.D.,
Shenoy,N., Sykes,S., Galagan,J., Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform, Broad Institute
Microbial Sequencing Center.
TITLE The Genome Sequence of Blastomyces dermatitidis strain SLH14081
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 963)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2019) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 963)
AUTHORS Champion,M., Cuomo,C., Ma,L.-J., Henn,M.R., Klein,B., Goldman,B.,
Young,S., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L.,
Berlin,A.M., Heiman,D.I., Hepburn,T.A., Saif,S., Shea,T.D.,
Shenoy,N., Sykes,S., Galagan,J., Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform, Broad Institute
Microbial Sequencing Center.
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2009) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_003101681).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..963
/organism="Blastomyces gilchristii SLH14081"
/mol_type="mRNA"
/strain="SLH14081"
/db_xref="taxon:559298"
/chromosome="Unknown"
gene <1..>963
/locus_tag="BDBG_01098"
/db_xref="GeneID:8507502"
CDS 1..963
/locus_tag="BDBG_01098"
/codon_start=1
/product="RNA interference and silencing protein"
/protein_id="XP_031576249.1"
/db_xref="GeneID:8507502"
/translation="
MANPQDQDPKVMKVEDALHPMTKKTFDLGSLKLIKGFPSCPGSAQRPLAGSVPGSCSCCSSQRNWHQGNLATDFRSTLVFKTKFSSDETIIEVHYCSEDEDEPAARATTYKVRVLYMKSLSISELTNYLNFTDLGQSFVGKQELMQALNIFLNHYAKSADNLATIGLTKSFSLHQNAARGDLSSGLKVIQGFFLSVRIATCHILVNINISHGAFYHTGPLPALMSSYSVWNTVALEKFLKLVQVQTTHLPEKRNRANEIIPRVKTIFGLARMDDGLGMAHPPCVRQHGAGAKDVEFWLDGEASSPGALKAEAKGQGQRDG"
misc_feature 211..456
/locus_tag="BDBG_01098"
/note="N-terminal domain of argonaute; Region: ArgoN;
pfam16486"
/db_xref="CDD:465134"
misc_feature 505..645
/locus_tag="BDBG_01098"
/note="Argonaute linker 1 domain; Region: ArgoL1;
pfam08699"
/db_xref="CDD:462567"
ORIGIN
atggccaaccctcaagaccaagatcccaaagtcatgaaagtcgaagatgcgttgcatccaatgacaaagaagacattcgatcttggtagtttgaagttaatcaaaggcttccccagctgtccgggatcagcccagaggccgttggcaggaagcgttcccgggtcatgcagctgctgctccagtcagcggaattggcaccaaggcaaccttgcaactgacttccggtctacccttgtcttcaaaactaagttttcgagtgatgagaccatcatcgaggtccactattgttctgaagatgaagatgagccggcggctagagccaccacatacaaggtccgcgtcctatacatgaagagtttaagtattagcgaattgactaactacctgaacttcacagatcttggccagtcatttgtaggcaagcaggagttgatgcaggctctgaatatctttctgaaccactacgctaaatccgcggacaaccttgccaccattggattgacaaagagcttttccctccaccagaacgcagcaagaggagatctcagttctggcttgaaagtcattcagggcttctttttgagcgtgcgcattgcgacttgtcacatcctggtcaacatcaatatcagccatggggctttctatcacactggccctttaccggcactcatgagcagttacagtgtttggaacaccgtagcgctggaaaaatttctcaaattggttcaagtccaaaccacgcatctgcccgagaagcgcaacagagccaatgagataattcccagagttaagactatctttggacttgctaggatggatgatggattaggcatggcccacccaccttgtgttagacagcatggggcaggcgccaaagatgtcgagttctggcttgacggtgaagctagctcccctggtgcactcaaggcggaagccaagggacaagggcaacgagacggctga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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