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Previous release (v1)
2025-11-16 06:57:06, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_028081208 2317 bp mRNA linear PLN 11-FEB-2019
DEFINITION PREDICTED: Vigna unguiculata protein NETWORKED 4B-like
(LOC114191805), transcript variant X2, mRNA.
ACCESSION XM_028081208
VERSION XM_028081208.1
DBLINK BioProject: PRJNA521068
KEYWORDS RefSeq.
SOURCE Vigna unguiculata (cowpea)
ORGANISM Vigna unguiculata
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
Phaseoleae; Vigna.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_040285.1) annotated using gene prediction method: Gnomon,
supported by EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Vigna unguiculata Annotation Release
100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2317
/organism="Vigna unguiculata"
/mol_type="mRNA"
/cultivar="IT97K-499-35"
/db_xref="taxon:3917"
/chromosome="7"
/tissue_type="first leaves, hypocotyl, epicotyl and
cotyledon"
/dev_stage="seedling"
/geo_loc_name="USA: Riverside, CA"
gene 1..2317
/gene="LOC114191805"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 ESTs, 8 Proteins, and 100%
coverage of the annotated genomic feature by RNAseq
alignments, including 38 samples with support for all
annotated introns"
/db_xref="GeneID:114191805"
CDS 134..2143
/gene="LOC114191805"
/codon_start=1
/product="protein NETWORKED 4B-like"
/protein_id="XP_027937009.1"
/db_xref="GeneID:114191805"
/translation="
MMKNQPSQWWWLESHSNTKLSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSLVEDFYRTHRSLAERYDQVAGIRQQKTGGSPFSPLKHHQPEKLMSFANDSYDSYSESCDVEESGESEIDDPEQEEEEDSKIDNCVELDGVQFVAANDVMEIERLGEENKDHKDLNKQKYNIYEAVMLWEEIEQLRKESRVQKDELNRKSIVFGELMILKEEIEQLSRENRAQKDELNQKAIICGEAMMLREEIEQLSKENRVLKDELSQKSIICDEVMMLREEIEQIRKENRAQKEELNQKDVICGEAIMSREEIEKLSKENRVLKDELNQKSILCGEVMMLREEIAQLRKENRAQKDELNQKDNSCSEIMMLREEIEQLGKENGGLKDELKKKDNICGEIMMLREEIEQLGKENGALRDELKKDNICDEIMMLREEIEQMGKENGALKNELNKKDNICGEIMMLREEIEQLGKENGALKVELNKKYIICGEIMMLREEIEQLRKENRGQKNELDQKGIKCEVTMFRGEIEEYTKENRVKNDELSPEDSVCGEEVMLRKEIERLGKDERAQSGTLCGEVKKLRQENSAQKDRLKQKDQEKIEVIRNLSLAIDMLKQENVKMRSFIAKESANKWKNPFGFKNFMGSLSEQLFNGITKNQPSLVAL"
misc_feature 158..379
/gene="LOC114191805"
/note="KIP1-like protein; Region: KIP1; pfam07765"
/db_xref="CDD:429647"
misc_feature <716..1666
/gene="LOC114191805"
/note="chromosome segregation protein SMC, common
bacterial type; Region: SMC_prok_B; TIGR02168"
/db_xref="CDD:274008"
ORIGIN
gtgtataaaatggtcctactctaatatcttgctatgtgtgaactctaattctatcgcaggcggtggtggcaagcattgcattaattcatgctcttggtgttcttgataacataaacaactgaagagggctaaaatgatgaagaatcaaccgtcacagtggtggtggcttgagagccacagtaacactaaactatccccttggcttcaatccactctcacggagctaaatgagaagacaaaggcaatgttaaaactaattgaagaagatgcagattcctttgcccaacgtgctgagatgtattacaagaagagaccacagcttgtgagcctggttgaagatttctataggacacatcgatcattagctgagcggtatgatcaagtcgctggaattcgtcagcagaagactggaggatcccccttttctccgctcaagcatcatcaaccagagaagttgatgagttttgcgaatgacagttatgatagctattctgagagttgtgatgtggaggagtctggggaatctgaaattgatgatcctgagcaagaagaggaagaggattccaaaatcgataactgtgtagaactggacggagttcagtttgtggctgcaaatgatgtgatggaaattgagagacttggtgaagagaacaaggatcataaggatctgaacaagcagaaatataacatttacgaagcagtgatgttatgggaagaaatagagcaactcagaaaagagagcagggttcaaaaggatgaactcaaccggaaaagcatcgtttttggtgaattaatgattctgaaggaagaaatagagcaactaagcagagaaaacagagcgcagaaggatgaactcaaccagaaagctatcatttgtggtgaagctatgatgttgagggaagaaatagaacaactcagtaaagagaatagagttctgaaggatgaactaagccagaaaagtatcatttgtgatgaagtaatgatgttgagggaagaaatagagcaaatcagaaaagagaatagagcgcagaaggaagaactcaaccagaaagatgtcatttgtggtgaagcaatcatgtcgagggaagaaatagaaaaactcagtaaagagaatagagtcctgaaggatgaactgaaccagaaaagtatcctttgtggtgaagtaatgatgttgagggaagaaatagcgcaactcagaaaagagaatagagcgcagaaggatgaactcaaccagaaagataacagttgcagtgaaataatgatgttgagggaagaaatagaacaattgggaaaagagaatggagggctgaaggatgaactaaagaagaaagataacatttgcggtgaaataatgatgttgagggaagaaatagaacaattggggaaagagaatggagcgctgagggatgaactcaagaaagataacatttgcgatgaaattatgatgttgagggaagaaatagaacaaatgggaaaagagaacggagcgctgaagaatgaactcaacaagaaagataacatttgcggtgaaataatgatgttgagggaagaaatagaacaattgggaaaagagaatggagcgctgaaggttgaactcaacaagaaatatatcatttgtggagaaataatgatgttgagggaagaaatagaacaactcaggaaagagaatagagggcagaagaatgaactcgaccagaaaggtatcaagtgtgaagtaacgatgtttaggggagaaattgaagaatacacaaaagagaatagagtgaagaatgatgaactcagtccagaagacagcgtttgtggtgaagaagtgatgttaagaaaagaaatcgaacgacttggaaaagatgaaagagcacaaagtggtaccctttgtggtgaagtaaagaagttaaggcaagagaatagcgcgcagaaggaccgtcttaagcaaaaagaccaagagaaaatagaggtgataagaaacctgagtttagctatagatatgctgaagcaggagaacgtaaagatgagaagcttcattgctaaggaatctgccaacaaatggaagaatccatttgggtttaagaatttcatgggatcattatcagagcagttgtttaatggaattacgaagaatcaacctagtcttgtagctctctagataaggttcacagagtaaatagctaagttttgtagaacataatattaaaagaggcttgtgtacatgttatggggacctgctcaagtaacctgcagatcttgtatacagtttagtatattcctaactaatccaagaccgagtatctagaggatttcctctacacttgtttttata
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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