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Previous release (v1)
2025-10-26 18:58:52, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_026987349 3016 bp mRNA linear INV 07-NOV-2018
DEFINITION PREDICTED: Drosophila persimilis putative leucine-rich
repeat-containing protein DDB_G0290503 (LOC6593906), mRNA.
ACCESSION XM_026987349
VERSION XM_026987349.1
DBLINK BioProject: PRJNA501994
KEYWORDS RefSeq; includes ab initio.
SOURCE Drosophila persimilis
ORGANISM Drosophila persimilis
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_020825294.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila persimilis Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.1
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 4% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..3016
/organism="Drosophila persimilis"
/mol_type="mRNA"
/strain="14011-0111.01,24,50"
/db_xref="taxon:7234"
/chromosome="Unknown"
/tissue_type="whole body"
/dev_stage="adult"
gene 1..3016
/gene="LOC6593906"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins, and 95% coverage of
the annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:6593906"
CDS 1..2883
/gene="LOC6593906"
/codon_start=1
/product="putative leucine-rich repeat-containing protein
DDB_G0290503"
/protein_id="XP_026843150.1"
/db_xref="GeneID:6593906"
/translation="
MNYGKYLFFVMLVLIPLAIDSLADIGVDQESCFMASDLEDQCGFVCYPIVKPLLQYLARCQEKDSQINQLEEEVRELRVESVKCKSETEALGKQLRNNFCDQKSVLKQALENVQKVQFQLSSELRYLQEDTRHQQTERVDAAVVRKLKIELSSKESLLTDVKSKLIQKYEILEQKEKSIKEKDKLLAEKDEYIKQMMEKYLPRSCETFEGTKGVRTIYVPATEPFSVLCNSIIDGSGWAIVLRELEGSASLDHKLNQYKEKGFGDLHDSFFIGRKNLYLMTREMPHEVFVMLKFLDGSIEVYKGTKVYMGDEEEDYVIKSFNTIPRIGDYSVQQTATSVSLDALFRKQFLPFDDLPEWKELTIMIRETLNIKVYSQNMLNIFIIVLVFFNLSENLTRGSDFHENQESCFVSRELEDQCAAVCYPTVKPLLKYMGICHQKDLHISGMQNQLQDQNEKVTKYKTQVEFLNKKLVDERSSSGLKNDLKETIDKVQNLRLELSEELKKLYRQKNNTVKNQHEEIANVKMQLKRKDEQNEKTMIEKDEIIKQKEKTMEEKDELLKQKKKIMEEKDELLKKKDNTLKNLQEEIANVKMQLKRKDEQNEKTMIEKDEIIKQKEKTMEEKDELLKQKKKIMEEKDELLKKKDNTLKNLQEEIANVKMQLKRKDEQNEKTMIEKDEIIKQKEKTMEEKDELLKQKKKIMEEKDELLKKKDNTLKNLQEEIANVKMQLKRKDEQNEKTMIEKDEIIKQKDKTMEEKDELLKKKDSTLKNLQKEIANVKIQLTSKDELLEQKEEQIKKKDQFIRHILDNADPKISETHTIDVPLAEPDESGWTIILQELEGLASLEKKLAQYKEKPFNNGNDSFFIGRKNLYFMAKATPHEILIQVKFVDGRSSSVQDIRFKVGNAEADYTLRSVNDNLPNRKYSITEMKALMAIQVLMKRKMPFSSRDWKQLTIKFREIQ"
misc_feature 601..>993
/gene="LOC6593906"
/note="Fibrinogen-related domains (FReDs); C terminal
globular domain of fibrinogen. Fibrinogen is involved in
blood clotting, being activated by thrombin to assemble
into fibrin clots. The N-termini of 2 times 3 chains come
together to form a globular...; Region: FReD; cl00085"
/db_xref="CDD:412152"
misc_feature 949..951
/gene="LOC6593906"
/note="gamma-gamma dimer interface [polypeptide binding];
other site"
/db_xref="CDD:238039"
misc_feature 1369..>2427
/gene="LOC6593906"
/note="chromosome segregation protein SMC, common
bacterial type; Region: SMC_prok_B; TIGR02168"
/db_xref="CDD:274008"
misc_feature 2473..>2844
/gene="LOC6593906"
/note="Fibrinogen-related domains (FReDs); C terminal
globular domain of fibrinogen. Fibrinogen is involved in
blood clotting, being activated by thrombin to assemble
into fibrin clots. The N-termini of 2 times 3 chains come
together to form a globular...; Region: FReD; cl00085"
/db_xref="CDD:412152"
misc_feature 2728..2730
/gene="LOC6593906"
/note="gamma-gamma dimer interface [polypeptide binding];
other site"
/db_xref="CDD:238039"
ORIGIN
atgaattacgggaaatatctcttctttgttatgcttgttctgatccctttggctattgattctctggcggacatcggagtggatcaagagtcttgtttcatggcaagcgatctggaagatcagtgcggtttcgtttgctatcccattgttaagcccctgcttcagtatttggccaggtgtcaggagaaggattcgcaaattaaccaacttgaggaagaggtgcgagagctaagagttgaaagcgtcaaatgtaagagtgaaacggaggcgctcggtaaacaattgagaaacaacttttgtgaccagaaaagtgtactaaagcaagccctcgaaaatgtccaaaaggtgcagtttcaactcagttccgagcttaggtatctccaagaagacaccagacaccagcaaacggaacgagtcgatgcagcagttgtgcggaaactgaagattgaattgtcgagcaaggagtcattattaactgatgtcaaatccaaattaatacaaaagtatgaaatattagagcaaaaggagaaatcaataaaggaaaaggataagctattggcagagaaggatgaatatatcaagcagatgatggagaagtaccttccgcgaagctgtgagacctttgaaggcaccaaaggggtccgaacgatctatgttcctgcgacagaaccgttctcggtgctttgtaactcgattatcgatggatctggttgggcaatcgttttgcgagaacttgagggatctgctagcctagaccacaagctaaatcaatataaagaaaaggggttcggagatctgcacgactcatttttcatcggtcgaaagaacctgtatctcatgacacgagaaatgccacacgaagtttttgtcatgttgaaatttctagacggttctattgaagtttataaaggcacaaaagtgtacatgggcgacgaagaggaagactacgttatcaagtcgttcaatacaattccaagaatcggagactactccgtccaacaaacggcaacgtcagtgtcactcgacgctctgttcaggaaacaatttttgccattcgatgatcttcctgaatggaaagaattgaccattatgatcagagagaccttaaatatcaaggtatattcccagaatatgttgaatatttttattattgtgttggttttttttaatttgtcggagaatttgacacgtggttcagatttccatgaaaaccaagagtcttgttttgtatcaagagaactggaagatcaatgcgctgccgtttgttatcccaccgtcaagccgttgcttaaatacatgggaatatgccatcagaaggatctacatataagtggaatgcagaaccaacttcaagaccaaaatgagaaggttaccaaatacaaaactcaagtagaatttctcaataaaaagttggtagacgagcgaagttcttctggcctcaagaatgacctaaaagaaaccatcgataaggtgcagaacctcagattggagctcagtgaagagttgaaaaagttatacagacagaaaaacaataccgtgaagaatcagcacgaagaaatcgcgaatgtgaagatgcaactgaagagaaaggatgaacaaaacgagaaaacgatgatagaaaaggatgaaattataaaacaaaaggagaaaacgatggaagaaaaggatgaactcttaaaacagaagaagaaaattatggaagaaaaagatgaactattaaaaaagaaggacaataccttgaagaatctgcaagaagaaatcgcgaatgtgaagatgcaactgaagagaaaggatgaacaaaacgagaaaacgatgatagaaaaggatgaaattataaaacaaaaggagaaaacgatggaagaaaaggatgaactcttaaaacagaagaagaaaattatggaagaaaaagatgaactattaaaaaagaaggacaataccttgaagaatctgcaagaagaaatcgcgaatgtgaagatgcaactgaagagaaaggatgaacaaaacgagaaaacgatgatagaaaaggatgaaattataaaacaaaaggagaaaacgatggaagaaaaggatgaactcttaaaacagaagaagaaaattatggaagaaaaagatgaactattaaaaaagaaggacaataccttgaagaatctgcaagaagaaatcgcgaatgtgaagatgcaactgaagagaaaggatgaacaaaacgagaaaacgatgatagaaaaggatgaaattataaaacaaaaggataaaacgatggaagaaaaggatgaactcttaaaaaagaaggatagtaccttgaagaatctgcaaaaagaaatcgcgaatgtgaagatacaactgacgagcaaggatgaattattagaacaaaaggaggaacaaattaaaaaaaaggatcagtttattaggcatattttggataatgcagacccaaaaattagcgagactcatacaatcgatgttcctttggcagaaccagacgaaagtggttggacaattattttgcaagaacttgagggattggctagtctagaaaagaagcttgctcaatataaagaaaagccgttcaacaatggaaatgattcatttttcatcggccgcaagaatctgtatttcatggcaaaggccacgccacacgaaattcttatccaagtgaaatttgtggatggcagaagctcttcggttcaagacattcgcttcaaagtgggcaacgcagaagcagactacacactcaggtcggtcaatgataatttaccaaacagaaagtactccattaccgaaatgaaagcgcttatggcgattcaggttcttatgaaacgaaaaatgccattcagttctagggactggaagcaattgaccattaagttcagagagatccaataatagaagaaggaaccattatgcgcccttgatagagaagtatttttatatatttaaatacaatttttgaattcttcggtaatcgatgaagctaccgtgaactaacgttaaaaaaatagcttaaaaaataaaagtt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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