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Previous release (v1)
2026-09-13 05:03:41, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_025497511 618 bp mRNA linear PLN 10-FEB-2020
DEFINITION Meira miltonrushii Isochorismatase hydrolase (FA14DRAFT_152158),
partial mRNA.
ACCESSION XM_025497511
VERSION XM_025497511.1
DBLINK BioProject: PRJNA479903
BioSample: SAMN02787052
KEYWORDS RefSeq.
SOURCE Meira miltonrushii
ORGANISM Meira miltonrushii
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
Exobasidiomycetes; Exobasidiales; Brachybasidiaceae; Meira.
REFERENCE 1 (bases 1 to 618)
AUTHORS Kijpornyongpan,T., Mondo,S.J., Barry,K., Sandor,L., Lee,J.,
Lipzen,A., Pangilinan,J., LaButti,K., Hainaut,M., Henrissat,B.,
Grigoriev,I.V., Spatafora,J.W. and Aime,M.C.
TITLE Broad genomic sampling reveals a smut pathogenic ancestry of the
fungal clade Ustilaginomycotina
JOURNAL Mol. Biol. Evol. (2018) In press
PUBMED 29771364
REMARK Publication Status: Available-Online prior to print
REFERENCE 2 (bases 1 to 618)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-FEB-2020) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 618)
AUTHORS Mondo,S.J., Kijpornyongpan,T., Barry,K., Sandor,L., Lee,J.,
Lipzen,A., Pangilinan,J., Labutti,K., Hainaut,M., Henrissat,B.,
Grigoriev,I.V., Spatafora,J.W., Aime,M.C., Nordberg,H.P.,
Cantor,M.N. and Hua,S.X.
CONSRTM DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2016) DOE Joint Genome Institute, 2800 Mitchell
Drive, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_020289943).
##Metadata-START##
Organism Display Name :: Meira miltonrushii MCA 3882
GOLD Stamp ID :: Gp0091365
##Metadata-END##
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..618
/organism="Meira miltonrushii"
/mol_type="mRNA"
/strain="MCA 3882"
/type_material="holotype of Meira miltonrushii"
/db_xref="taxon:1280837"
/chromosome="Unknown"
gene <1..>618
/locus_tag="FA14DRAFT_152158"
/db_xref="GeneID:37019292"
CDS 1..618
/locus_tag="FA14DRAFT_152158"
/codon_start=1
/product="Isochorismatase hydrolase"
/protein_id="XP_025357034.1"
/db_xref="GeneID:37019292"
/db_xref="InterPro:IPR000868"
/db_xref="JGIDB:Meimi1_152158"
/translation="
MATRSIPRLEQSSSALFLCDIQERFTKAIHEFDNMAKASSKLLRGAQILEIPVFTTEQNSKALGSTVDVLKKDIPENSTIVDKTRFSMVLDDGTTDKWLRDHKVQNVMIVGIESHVCVLQTTLDLLKKGFNVFIIRDAISSCNKQEVPLAIERMRLAGATITTSESALFELMLDSKHPHFKAISGLIKTEKDSTKAALEALTSRI"
misc_feature 43..516
/locus_tag="FA14DRAFT_152158"
/note="Cysteine hydrolases; This family contains
amidohydrolases, like CSHase (N-carbamoylsarcosine
amidohydrolase), involved in creatine metabolism and
nicotinamidase, converting nicotinamide to nicotinic acid
and ammonia in the pyridine nucleotide cycle. It...;
Region: cysteine_hydrolases; cl00220"
/db_xref="CDD:444760"
misc_feature order(58..60,247..249,349..351)
/locus_tag="FA14DRAFT_152158"
/note="catalytic triad [active]"
/db_xref="CDD:238245"
misc_feature 334..339
/locus_tag="FA14DRAFT_152158"
/note="conserved cis-peptide bond [active]"
/db_xref="CDD:238245"
ORIGIN
atggcaaccagatcaattcctagacttgaacaatcttcaagcgctttgtttttgtgtgatattcaagaacgttttacaaaagcaattcatgaattcgataatatggcaaaagcatcttcaaaacttttgaggggcgctcaaatcttggagatcccagttttcacaactgaacaaaactcgaaagctcttggatcgacggtagacgttctcaagaaagatatcccagaaaattccacaatcgttgacaagacccgattcagtatggtattggacgatggaacaacagataaatggctacgcgatcacaaagttcaaaatgtgatgattgtcggaattgagagtcacgtatgcgtcttacaaacgacattggacttgctcaagaaaggcttcaacgttttcatcattcgtgatgcaatctcttcttgtaataaacaagaagttccacttgccatcgaaagaatgcgtttggctggcgctacaatcacaacatccgaaagcgctctgtttgaactgatgctagattcaaaacatccccatttcaaagctatcagtgggctaatcaagacggaaaaggacagtacaaaagccgctcttgaagcactcacatcacgtatttga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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