LOCUS       XM_025181206            6348 bp    mRNA    linear   VRT 04-JUN-2018
DEFINITION  PREDICTED: Pelodiscus sinensis argonaute 4, RISC catalytic
            component (AGO4), transcript variant X3, mRNA.
ACCESSION   XM_025181206
VERSION     XM_025181206.1
DBLINK      BioProject: PRJNA221645
KEYWORDS    RefSeq.
SOURCE      Pelodiscus sinensis (Chinese soft-shelled turtle)
  ORGANISM  Pelodiscus sinensis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia;
            Trionychidae; Pelodiscus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_005851450.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pelodiscus sinensis Annotation
                                           Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6348
                     /organism="Pelodiscus sinensis"
                     /mol_type="mRNA"
                     /isolate="Daiwa-1"
                     /db_xref="taxon:13735"
                     /chromosome="Unknown"
                     /sex="female"
                     /country="Japan: Saga"
     gene            1..6348
                     /gene="AGO4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 16 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:102448031"
     CDS             16..2505
                     /gene="AGO4"
                     /codon_start=1
                     /product="protein argonaute-4 isoform X3"
                     /protein_id="XP_025036991.1"
                     /db_xref="GeneID:102448031"
                     /translation="

MVIYYLKLVFLTFTGPPASLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSIQWVSVVSLQLLLEALAGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLGFSGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTGRVLPAPMLQYGGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKLTYVGLQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQETSQELLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHVSGQSNGRDPQALAKAVQIHHDTQHTMYFA"

     misc_feature    82..2499
                     /gene="AGO4"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
     misc_feature    1204..2376
                     /gene="AGO4"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1615..1617,1627..1629,1663..1674,1681..1683,
                     1705..1707,1714..1716,1726..1728,1738..1740)
                     /gene="AGO4"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1819..1821,1825..1827,2065..2067,2344..2346)
                     /gene="AGO4"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

aggacattgtgttacatggtcatttattatctcaaacttgtttttttgactttcacagggcctccagccagcctcttccagccgccccgccgccccggcctgggaactgttgggaaacctatccgtctcttagccaatcattttcaggtgcagatccctaagattgacgtttatcactatgatgttgatatcaaaccagaaaaacggccccgaagagtgaacagggaggtggtagatactatggtgagacacttcaagatgcagatatttggtgatcggcagccaggatatgatggcaaaaggaacatgtacacagcacatccactgcctattgggagagatagggtggacatggaggtgacgctcccaggtgaggggaaggatcagacatttaaagtgtctattcagtgggtatcagtggtcagccttcagctgcttctggaggctctggcaggacatttgaatgaagtccctgaggactctgtacaggcacttgatgtaatcacacggcaccttccttccatgaggtatacccctgtgggccgttccttcttttctcctcctgaaggttactaccatcctctgggagggggcagggaggtttggtttggattccatcagtcggtcaggcctgccatgtggaacatgatgctcaatattgatgtatcggcgaccgctttctatcgtgcccagcctatcattgagttcatgtgtgaggtcctggacattcaaaacatcaacgaacagacaaagcctcttacagactcccagcgtgttaaatttaccaaagaaatccgaggtcttggattctcaggtctaaaagtagaggttacgcactgtggccagatgaagagaaaatacagagtttgcaatgtaaccaggcgaccggcgagccatcagacgtttcctctgcagctggaaaatggacaggcaatggagtgtacagtagctcagtattttaagcaaaagtacagtctgcagctgaaatatcctcatcttccttgtctccaagtgggacaggaacagaaacacacctatttaccacttgaggtgtgtaacattgtggcaggtcaacgatgtatcaagaagctaacagacaatcagacatcaactatgataaaagcaactgcaaggtctgccccagacaggcaagaagaaatcagcagacttgtgaagagtaacagtatggtaggcggaccggatccgtatctgaaggagtttggcatcgttgtccataatgaaatgacagagttaacaggaagagtattgccagcaccgatgctgcagtatgggggccggaacaagactgtagctacaccaaaccagggagtttgggacatgagagggaagcagttctatgctggcattgagattaaagtttgggctgttgcctgctttgcacctcaaaaacaatgcagggaagacttgctcaagagtttcacagaccagctgcgcaagatctccaaggatgcagggatgccaatccaaggccagccgtgtttctgcaaatatgcacaaggggcagacagtgtggagccgatgttcaaacacttgaagttgacctatgttggtctgcagctcatagtagtgatcctgcctggaaagacacctgtgtatgccgaggtgaagcgtgttggtgacactctgttaggaatggccacgcaatgtgtccaggtgaagaatgtggtaaaaacctcaccccaaactctatccaatctttgtctgaagataaatgcaaagcttggagggatcaacaatgtgcttgtgcctcatcaaaggccctctgtgttccaacaaccagtgatcttcctaggagcagatgtcactcaccctcccgctggggatggaaagaagccttccattgctgctgtagtaggcagtatggatggtcaccctagccgctactgtgctacagtccgtgtgcagacctcccgtcaggagacttcccaggagttactgtatagccaggaagtgatccaggacctgactaacatggtacgggagctgctgatccagttctacaaatccactcgcttcaagcccacgcggatcatttactacagaggaggagtttcagagggacagatgaaacaggtgggtaaaagtggtaacgtaccagccggcactaccgtggacagcaccatcacacatccctctgaatttgatttttacctctgtagccatgcaggaattcagggcaccagccgcccatctcattatcaggtcttgtgggatgacaactgtttcactgcagatgaattgcaactgctaacctatcaactgtgtcacacatacgtccgctgtacaagatccgtctctattccagctcctgcatactatgccaggctggtagcatttagagcaagatatcatcttgtagacaaggatcatgacagtgctgaaggcagccacgtttcaggacagagcaacggccgggatccccaggctctggcgaaggccgtacagatccaccacgatacccagcatacaatgtattttgcctgagtccctgtgggaagacgaggcggaaccaacaacccacgcagtcctgaaatggtttgaatgcctattgctttttagctaggacccagtttatttcagactgcgtactaccagcagctctgaacagtcgcactgaatctacacttcacagcaaagtctgatgcaccaacacaattgagccatttgttttgttgttttaagtaatagaaattcatgaactgtcttttctgatgcattggactgaatttttacctcaaagcgcaaaaggccgatcatcctgaaatttttaaaagacttggcatgacagatttttattgaatattttgctagctatggtttttaagttctctcctcatcccactagtttatcaagatgactaattccctgtcttcatgcactgcttagtaagtatgcatactttggcaaaacattttactccagttcagtgtaaccattctattgtgtggggccatagtttttttttttttttttaatggagattttagatttcactactgtaaatgccttttaacaaacattaactttcacaggtattgcagttttgtcagttttactagttatctttttaaactctgcagacttgggctgcaaagcaattgcactatactgcgaattcagctaggtggttcttgttctgtgaatgtgtaacataaccagatagtgatacctggcagcaggttttaattatgatggttacaaataatactgccatgatatggtaacaagtactgaaccagttccccttctaaaaatgataaatattttaaaaaattagcttttagatatttttcaaacttttacaaaagtgcccactttatgctgctgtgtggtttgataaaactaagtgattttaaaacttttctcatagaaggtttaactttggcaataagtattttttaagccccctgacagtgtaaaattctagctgaggattgtgcatgagttcaaccaaccttcttgtgtcgttttctgaacacacaacttggcagtttctgaaactaatcagaagacgcacttccatggtttctttttgaataattatttttaactgttttatattcactgttggtgtcctgtctaccactttttttataagcttggaaactgggtgttatatgtaggaaaggcttgccaatctgtacagttctaagtgtattgtgtgactgtagcaacctgaagactggtacctgcgttctattttctccccctgggaatctaggttgcacacacaaattacatataacagcatgcttaaaaggtgtaaatcaaatatattgattctgtcccaacctagaaattagggcttttttatttgcttggctttttttttttcagtaaaatgtataaaaaggaagagggggcttcgttttgcttaatacttttggaacccacaaacagtacattgagaatagattcttttaatgttaatataagttgacacagacgcagatctcattctcaaattcaatttagcaaaacaatacaccactgcagaagttaagaaaagtttgaaaagtcaccagctattgcactgtattctctgccattggtgtggggtttgctgctaagttgtgtgttgttccagagcttggaaaccagccctctccaaagctcagcaatatgaaatgctgtttgtttttttcccccttaagtcttctaaataagcttgtaaataaaataaagtttacattttaaatgctgtctttcagttgtatctaagaaagctgaagttagtcttcaagacagttttataacctactttcagagtaatatgcctcattaaaaatagttaaaacttttttttcctgttggaaactgggactgaagcaagctctgctcttgcacgtagtgtggacaggtttagataagatcctttttaatttgttacactttttttaaagaatacctcacttgggtaataatcaggacaggtgggtgggagactgactgctgcttcagctagatggctgcttttcttaatacttgttcagggagaatacgaaaacccttttagaatgaactttgacccaatcaatggtgaattttggcaccttgaagagaaattgagcaccctgtagattataggatcaaagatccctggattcatgcactaggcaagaatgtgactgatagttaagggtggttaagagacttaatttttaccgccagatagtggtccagtgccaagcactcctagttcagattgagtgaaatgagtctctcatctgcttgcctgcaattagcctgaatgtgtgacctcagctagcactgggaagcgtggcaagaacttcctaactcagtcttgtgttgttagaacatcataggactcaaatacgagtgagggtgcagggctgccactttgagagagagagaactgaagcgcatttaggtttagaattgttgtcactgaagggtgtgtatctttgggaggctataactgcaagatccaagttgcagcaatattcttgtatacagttctgaaagctgaatgttgaggttcagccggaggagctgaattcaccccttgggactgactgaatcgttatgcatgtgtcaatcaatgggaagatgtgcattctgtagctgtagttcttagggtgtttggtttttttaataaataaagcctgttggccaccgtttagctatgtggtgtggaagattttaaatgtagcagagtttaatgagttggggggatgggcgcttgacagtgaagactagcagaaagctcgcttttgaaccagttctgctttctttgtaaacagttggattctgaacaagctctggaaggaaccagttggcctgtctcagacattcagaggggccccatttacttattgttactgtaagtactacagttcagtgtagtgcctgtggctgcatccaaagggcctaaaaggttgtgaaagatgggcaaacatgcttcttggcctggcctacactagaaaactgggtcagcttcactgcatcactccggggcgtggaaaatcgacaccctgcaggacgtagtgaagctgaccagtccaatgtgcgaggtcgatggaagaattctttcaccagcatggggagttgtcagtgcttcgaggactgcagcgatgctgctgtagtgtttccagtgtagaccagcccacacagtacgtatcttgttccagacacatgtcagagcttatttacctatatcaaaagctttgcccttcagatgggccaaagtaatcctcttgttcagatagtgtttaacatttcccccccccaaactacctttgtggatgtgctgtagaatttttcttgctcaatagcaaggcagtagctctactttcattttaagaaagcagagtttggagggcattgtatcaatactgtttcaattgcaaggttttttccttgtgaaatttgaggaaagatcttgtaatatcacagattttcttataccttgctattgacattttcatgatatttctatgtctagaggctgaaacttcagtgtaaatgtttgcatttgttcattttgacttatgatgtaatttttttgtttctatattgttagacttgtaatgtttaaaattgtattttattaaatttggactggatgtatgtctatagcaatacgaggtactctttctaaactgttatgggtgggctagcagccccatgttgcgataagatgctggtcgtgtacaatttgcaatgtattttttttagcctgcagggatattttgtgttcatgtgtccaaacaaataaaaatggcattcttgtgccaaatgttctgtttttccttgttggtgtctaataaaaatgcaatgtacaaaatcagcaacagatattgttg

//