LOCUS       XM_023992780            2147 bp    mRNA    linear   VRT 17-DEC-2024
DEFINITION  PREDICTED: Salvelinus sp. IW2-2015 vimentin-related 2 (vimr2),
            mRNA.
ACCESSION   XM_023992780
VERSION     XM_023992780.2
DBLINK      BioProject: PRJNA433373
KEYWORDS    RefSeq.
SOURCE      Salvelinus sp. IW2-2015
  ORGANISM  Salvelinus sp. IW2-2015
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Salvelinus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_036848.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 17, 2024 this sequence version replaced XM_023992780.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_002910315.2-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/13/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Salvelinus sp. IW2-2015"
                     /mol_type="mRNA"
                     /db_xref="taxon:2691554"
                     /linkage_group="LG8"
     gene            1..2147
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 long
                     SRA read, 4 Proteins"
                     /db_xref="GeneID:111967613"
     CDS             130..1311
                     /gene="vimr2"
                     /codon_start=1
                     /product="alpha-internexin"
                     /protein_id="XP_023848548.1"
                     /db_xref="GeneID:111967613"
                     /translation="

MAMLRVSSYRRQFEEQRSRNGRSSGGCGGQYRSSAVKARGAAAEECTCDQLDFVAAKTLNKESLVRFAKDRSIIAALNDRFVALINMARCFEEDNESLEAQICELEERMTGQQTTSTAVAVPEYSLDAVVERLRKERDQSLFDAEELRRELECLQEQYEETVQQRTLIQLEQEDVGLEVDVVTTDCLALREQVKIYEEQLARMEAQHETTVQNMVAPVDGPXAAGRGVLEFCNPDIKSAIIYIKENYSQLAETIQCECRETGVVVAGAVVAIGAGKELTVARPAGVTGVGQITDVSELKKLIAELEKELAELEKCGEELEDEIEMKREAYVEEIFELECRIEEMREQQHDMQVQMREQCDDYEELLGQKMAREIEIAAYRGLVEEEDERLCYL"

     misc_feature    358..1296
                     /gene="vimr2"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:459643"
     polyA_site      2147
                     /gene="vimr2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

atccatcgcctggatgcaacattccccttcatctccatgtataaagtcctcaaactggactcactgtcatccgtttgccattatttgttaytgtagccccagactgcagtacgtgtcccagtatcaaccatggccatgctgagagtgtcgtcctaccgccggcagtttgaggagcagaggagtcggaatggacggtccagcggtggctgtggagggcagtaccgctcctcagcggtcaaggccaggggtgcggctgctgaggagtgtacgtgtgaccagctggactttgtggctgccaagacgctcaataaggagagtctggtccgattcgctaaagaccgcagcatcattgccgccctaaatgatcgctttgtcgccctcatcaacatggcacgctgctttgaggaggacaatgagtctctggaggcccagatctgtgagctggaggagaggatgaccggccaacagaccacctccactgccgtagctgtccctgaatacagcctggacgccgtggtggagagactgcgcaaggagagggaccagagcctgtttgatgcggaggagctgaggagagagctggagtgtctgcaggagcagtatgaggagaccgttcagcagaggaccctcatccaactggagcaggaagacgttggcctggaagtggatgtagtgaccacagactgtctggccctgagggagcaggtgaaaatctatgaggaacaactggctcgcatggaggcacagcatgagacgacggttcagaacatggtggcccctgtagatggtccagytgcagcagggagaggagtcctggagttctgcaaccctgacatcaagtcagccatcatatatatcaaggagaactacagccagctggctgagaccatccagtgtgagtgcagggaaactggtgtggttgttgctggtgctgttgtcgccattggtgctggaaaggagctgacggtggccagacctgcgggggtcacaggcgttggccaaataacggacgtcagcgaactgaagaaactgattgcagagcttgaaaaggagcttgcagagctggagaagtgtggtgaggagctggaagatgagattgagatgaagagagaagcgtatgtggaggagatctttgagctggagtgtcgtattgaggagatgcgggagcagcagcatgacatgcaggtccagatgagggaacaatgtgatgactacgaggagctgctgggtcagaagatggcccgggaaatcgagatcgctgcctacagaggtttggtggaagaggaggatgaaaggctttgctacctgtgagaggaaccgatgcagaccagaccaaccaacctgctttcggcgatggatatcctcccatacagatttcatgcgttgccaaaacacaacagaccaaagtcagccagatcacatgaagctaaccgccacacaaccatttgagcagatgtaaaagtatcatgacagattaacgaggtctggagggcgtgccagggccattgataacaggtcactggctggtgacccctgtcctataagaaagatggaattgtctaacgttggggtggagggggatgggactggatagagtgtgtgtattcaatgtctgtgaaatttccctaagtggtctctatctgttgtggctacagtctctggagctaactcactgatatgacacacacacacacacacacacacacacacacacacacacacacacacacactgactgactctgcagaataatttacctcccgttaaccctcactccagcatgagcccattaaacgctcttaaccactgacctctccactgttcacagccattggacagctcttatatccaataagatagccttaaccgatcatggcaggtcaccttccatttgttttacagtcatgcgttaatgtgggttttacacagaaatgtcagtcaagtcagttacactgttcatgtatacttgcgaactggtatattagctttgcaaatggttgtcgaagttgacattctgcagctcccgtacagctggccagcagatagcttgtgtgctgtccctgacttagttgctyattctctgcccatgacacctggaggaacttagtcaagttaaaaccataacaataaaaaaacattttgcttga

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