2024-04-20 19:35:08, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_022518314 660 bp mRNA linear MAM 20-SEP-2017 DEFINITION PREDICTED: Enhydra lutris kenyoni claudin 34 (LOC111157088), mRNA. ACCESSION XM_022518314 VERSION XM_022518314.1 DBLINK BioProject: PRJNA407952 KEYWORDS RefSeq. SOURCE Enhydra lutris kenyoni (northern sea otter) ORGANISM Enhydra lutris kenyoni Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Enhydra. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019154136.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Enhydra lutris kenyoni Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..660 /organism="Enhydra lutris kenyoni" /mol_type="mRNA" /isolate="GAN:26980312" /sub_species="kenyoni" /db_xref="taxon:391180" /chromosome="Unknown" /sex="male" /tissue_type="blood" /dev_stage="adult" gene 1..660 /gene="LOC111157088" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:111157088" CDS 13..660 /gene="LOC111157088" /codon_start=1 /product="claudin-34" /protein_id="XP_022374022.1" /db_xref="GeneID:111157088" /translation="
MLLLINSANCQVAGFAMATVGWILTTTSMGLVEWRVWYIENNALMPPGLVCVGMWKVCVYHHVSDHNKVTLCQRYSYRDPYLPLDIRVSQNLLLIASILGLLGRASIIFALRNAYLGILRENATFNPFVASGILNLASGICIAITVVWNYHSVMSEQGISFPPSLLIPFKPNTQEIGSAFLVACLAAFMMLLSGVIFLSHKFSTATQVHPQTSDT"
misc_feature 70..609 /gene="LOC111157088" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN
tgcgcactggccatgctgctgctcatcaacagcgccaactgccaggtggccggctttgcgatggccacggtgggctggatcctgaccaccacgtccatgggcctcgtggaatggagagtgtggtacatagagaacaacgccctcatgcccccgggcctggtgtgcgtgggcatgtggaaagtctgcgtgtaccaccacgtcagcgaccacaacaaagtcaccctgtgtcaacggtacagctaccgcgacccgtatctcccgcttgatattcgtgtctcccaaaacctcctgctgatcgccagcatcctaggcctcctggggcgagcctccatcatcttcgctctcaggaacgcgtacctgggaattctgcgggagaacgccaccttcaacccattcgtcgcttcgggaatcctgaacctggcctccggcatctgcatcgccatcaccgtggtctggaattaccactccgtgatgagcgagcagggcatttccttccccccgtcgctgttgattcccttcaagccaaacactcaggagatcggcagtgcctttctggtggcgtgtctggccgccttcatgatgttgctgagtggggtgattttcctgtcccacaagttctccacggctacccaagtgcatcctcaaacttccgacacgtga
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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