LOCUS       XM_020747748            4086 bp    mRNA    linear   INV 10-APR-2017
DEFINITION  PREDICTED: Orbicella faveolata systemic RNA interference defective
            protein 1-like (LOC110042383), mRNA.
ACCESSION   XM_020747748
VERSION     XM_020747748.1
DBLINK      BioProject: PRJNA381078
KEYWORDS    RefSeq.
SOURCE      Orbicella faveolata
  ORGANISM  Orbicella faveolata
            Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia;
            Faviina; Merulinidae; Orbicella.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018148822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Orbicella faveolata Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4086
                     /organism="Orbicella faveolata"
                     /mol_type="mRNA"
                     /isolate="FL"
                     /db_xref="taxon:48498"
                     /chromosome="Unknown"
                     /sex="hermaphrodite"
                     /tissue_type="whole organism"
                     /dev_stage="adult"
                     /geo_loc_name="Panama"
                     /collection_date="Aug-2013"
                     /collected_by="Nancy Knowlton"
                     /identified_by="Nancy Knowlton"
     gene            1..4086
                     /gene="LOC110042383"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 7 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:110042383"
     CDS             1457..3598
                     /gene="LOC110042383"
                     /codon_start=1
                     /product="systemic RNA interference defective protein
                     1-like"
                     /protein_id="XP_020603407.1"
                     /db_xref="GeneID:110042383"
                     /translation="

MGVRIATFLFTALLVIAWPFAVQAKMFADCTFGKINTTEGQKMTAKFTAKLAAFKHISHSCFVETDGQNHQNHFLQVRAKRNKESKGFLHVSVYGTDESRILGHLDVSTSEADWSSLIVCPSRYSNEVQDKHLIFSGSPNLSFTVQIDSSPRRIKLNEPQTVRVTPENVQVFQFLPPEDIAKTQLDVTVTSESGDVPAYLKVSRVCKDVEKDNIDEVDYKGESIRLSFAKKGRITLSKVSVPPLTDSTSSWFIGIAIKNATGETPFNAKKSVTLELNKSFDYSYGGTISLFVLLSIVAGLLISLAWAFCIQRLHQNTDKSQGTETELSRQGNQPQQSSSRRKPRASSPLVNKIKTIKPTHSYTAAIVGFMLMIGAGQFVFANWHLMKDEGDRDICYYNDFCYRVSQWHDIPFNLMISNLVYIIHGLILATFVYYWERKERLTKKNLSKPEEHVFSIGYAFAWAMIFEGLFSLVYHLCPSKLTFQFDTAFMFVIAGLIVISLYNGTAKDPVGAANFFLYFLVPLLIFNYLGAVRHSETGLPTLIEIFIFVALGFWLVGVFIWAGLKLFKADRDNGNNAVIMSIGFAVGFIVPIVFLICFNSNLSQAFLISCIAESVIAILTKFVAQCRRKRLECERYLVCGIIYVLLMLSLWSYAFYLFFEKGTTDKAETPEKSRNLNQDCITRGFFDDHDLWHILSSHALLMTVYLVMSMSRE"

     misc_feature    1985..3583
                     /gene="LOC110042383"
                     /note="dsRNA-gated channel SID-1; Region: SID-1_RNA_chan;
                     pfam13965"
                     /db_xref="CDD:464057"
ORIGIN      

aggcgttaaataatgatcggccccttatctatctatcggtctagtttaaattgctcttaattaaaatgcccttgatgagtttctttttgatcggctttaaatttaacacaaattaaatcttaaacagtgagaaagtacagcgtggtttgccattgcgggagatgaataagtttttgaacgaagccagtccttacaattgtttcgggagagaaaatgataaatgtgtttagtcaaacgtagtttgatattctgctcaagtaaggctcctttagtttagtgcattatctttgacttggcgaatgaatcactttctcgataatcaattacacaatttcttagtggttgaacataatttatatgatctggaaatctgacaacactcaagtcttcatttgaattaactttgtacgtaggtattgacaataaaggagaaaatatattgtacggtaagtggtaactaaggatagtttcagcattgacacgcactcgataattatgtactattgtaagttattgtgacaaagattacgcgtttttctatatctgccaaatacgttaaatacctattttgtaattaaaattatatgtatattaaagtaaataacggtcacaaaaatgtctcagtgtctgtggatgtaacatcaaaagacataaaccaattgagccttggtaaatcgtattctggagatgttcctgttgcattccctgaaacactcatcctcccagtacgaggctccgggaaataacaacagagtttgtggggtttattccccagagcctcgtgctgatgtccattgttttaggctgaattttaatatatcgaaattggtctattgtcttacagttaaaatgcatacgatcgcggcaatatcggagtgatcaaatataaaatcagccagtttatgcccacgaaccaactggagaatggaagaagtcgagccaggaaaagagaccttgaccaaagtaatccgctccatctttgagaaagaaactgataacagggcgattcgtctttgttgtgcactgtttcttgacatcccttgcaatctttggaagcaggccatattgagataagctggcttagccttttttttctcttctcctcttcaagaggacgcgctttaggcctggccacaaatcaacgcacactcaggtgcattagaggtctacggtacggagagacgccatcttagttaaaatctaaccggaggggcatgggactgatagtttagctttcccgtttcacactgcttaagaaacaagcgcagcaattacaagtattagtttaactcaagcataaaagatccagtgcaagtgctaacctatgcaaattgcttcttggtttgcttttgtgttcgcacggccttagaggtgattcacgcttgcgtgcgttgacgtcacacagtcggggctcttgacaatataggcagacagatttctattcctgcgtttcagcatgggcgttcgcattgccacgtttctgttcactgccttgcttgtgatagcatggccatttgcagttcaagccaaaatgtttgcagactgcacctttggaaagataaatacaacagaaggccagaaaatgaccgcgaaattcactgccaagcttgcagcgttcaagcatatcagccattcctgctttgtggagacagacgggcaaaatcatcaaaatcatttcttacaagtgagagctaaaagaaacaaagaatcaaaaggattcctgcacgtgtcagtatatggaacagacgagtcgcggatattgggacatttggacgtatccacgtctgaagctgattggagttctcttatcgtttgcccgtctcgttacagcaatgaagtccaagataaacatttaatattttcagggtctccaaacctctcttttacagtacaaatagatagttcaccacggaggataaaactaaatgagccacaaacggtgcgagtcaccccggagaatgttcaagtcttccagttcttgccaccagaagacatcgcaaagacacagcttgatgttactgttacttctgagtcaggtgacgtgccagcttatttgaaagtgtcacgtgtttgtaaggatgtcgaaaaggacaatattgacgaagtggactacaagggtgagtcaattcgtctttcgtttgcaaagaaaggacggattactttgtccaaggtctctgttcctcctttgactgattccacatccagctggtttattggaattgcaattaagaatgcgacaggagaaacaccgtttaatgcaaaaaagtctgtcactttagaactgaacaaatcatttgattactcctatggtggaacaatatctctcttcgtgttgttgtcaatagttgctggtcttttgatatcattagcatgggcattctgcattcagcgtttacaccagaacacggataaatctcaaggcactgaaactgaactctcacgtcagggaaatcagcctcaacaatcttcatccagaaggaagccacgtgcaagcagtcctctcgtcaataaaatcaagactattaagccgacgcattcgtacaccgctgccattgtgggttttatgttgatgatcggtgctggtcagtttgtctttgccaactggcatctaatgaaagacgaaggtgatagagacatctgttattacaatgacttttgctacagagtaagtcagtggcatgatataccatttaacttaatgataagtaacttagtgtacattattcatggcctgattttagctacatttgtttactattgggaacggaaagaaaggcttactaaaaaaaatctttccaagccagaggaacatgtattttccattggatacgcttttgcctgggcaatgatttttgaaggtcttttttccctagtttaccatctttgcccaagtaagttgacatttcagttcgatactgcttttatgtttgttatagctggactgattgtcatttcgttgtacaatggtaccgctaaagatcctgttggggcagcaaattttttcctttattttttagttccacttttaattttcaattaccttggggcagtccgtcattccgaaacaggattacctactctaatagaaatatttattttcgtcgctttgggattctggttggtaggtgtttttatttgggccggattaaaactgtttaaagctgaccgagataatgggaacaatgccgttattatgtcaattggctttgccgttggtttcattgtcccaattgtttttctcatttgttttaatagtaatctttctcaagcatttttgatttcttgcattgcagaaagcgttattgccattcttacgaagtttgtagctcaatgcagacgcaaacgcctggaatgcgaacgttatttagtttgcggaattatttatgtcttgctaatgttaagtttgtggagttatgctttttatttgttttttgagaaaggaacaactgataaggcggaaactcctgaaaaatcccgaaatctaaaccaagactgtatcacgaggggtttttttgatgaccatgacttgtggcatatcttgtcatctcacgctttacttatgacggtgtatttggtcatgtctatgagccgcgagtgaaggaaaaaacgcgcgtaatatatttgtctgaaaacccacatcaaagattgttgatgggatttgtaataagtaattttggcttcttcgaaaacgtttatgacgcagcaaggtgttcatggacgtgctcgcaaaacgtacgtttcttatcatccaatcagaaacagcacgaacatcactctgaaaatgacttggcagtttgtcttcatatcgcacaaacgaagtattacggatagtgaaaatactttacagaacatctttgaccaaaaagggttaaataaaagctacacaggaagtacacagtcaaacctccggctgtgaccacctgtcgtgagcgaacatctcgctctcatcagcgaccggttttccaaaataccacaagcttccaaatcaaatcattacatttgaaacctctggtaagcgaccaactctcgtaagcgaccgcgaccacttttagaactaaaagtttgaaattttcttttgtcttttgt

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