LOCUS       XM_020211832            1158 bp    mRNA    linear   PLN 29-NOV-2019
DEFINITION  Suhomyces tanzawaensis NRRL Y-17324 nonsense-mediated decay protein
            4 (CANTADRAFT_91529), partial mRNA.
ACCESSION   XM_020211832
VERSION     XM_020211832.1
DBLINK      BioProject: PRJNA374041
            BioSample: SAMN00794653
KEYWORDS    RefSeq.
SOURCE      Suhomyces tanzawaensis NRRL Y-17324
  ORGANISM  Suhomyces tanzawaensis NRRL Y-17324
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Suhomyces.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Riley,R., Haridas,S., Wolfe,K.H., Lopes,M.R., Hittinger,C.T.,
            Goker,M., Salamov,A.A., Wisecaver,J.H., Long,T.M., Calvey,C.H.,
            Aerts,A.L., Barry,K.W., Choi,C., Clum,A., Coughlan,A.Y.,
            Deshpande,S., Douglass,A.P., Hanson,S.J., Klenk,H.P., LaButti,K.M.,
            Lapidus,A., Lindquist,E.A., Lipzen,A.M., Meier-Kolthoff,J.P.,
            Ohm,R.A., Otillar,R.P., Pangilinan,J.L., Peng,Y., Rokas,A.,
            Rosa,C.A., Scheuner,C., Sibirny,A.A., Slot,J.C., Stielow,J.B.,
            Sun,H., Kurtzman,C.P., Blackwell,M., Grigoriev,I.V. and
            Jeffries,T.W.
  TITLE     Comparative genomics of biotechnologically important yeasts
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 113 (35), 9882-9887 (2016)
   PUBMED   27535936
REFERENCE   2  (bases 1 to 1158)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2019) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1158)
  AUTHORS   Riley,R., Haridas,S., Wolfe,K.H., Lopes,M.R., Hittinger,C.T.,
            Goker,M., Salamov,A., Wisecaver,J., Long,T.M., Aerts,A.L.,
            Barry,K., Choi,C., Clum,A., Coughlan,A.Y., Deshpande,S.,
            Douglass,A.P., Hanson,S.J., Klenk,H.-P., Labutti,K., Lapidus,A.,
            Lindquist,E., Lipzen,A., Meier-Kolthoff,J.P., Ohm,R.A.,
            Otillar,R.P., Pangilinan,J., Peng,Y., Rokas,A., Rosa,C.A.,
            Scheuner,C., Sibirny,A.A., Slot,J.C., Stielow,J.B., Sun,H.,
            Kurtzman,C.P., Blackwell,M., Jeffries,T.W., Grigoriev,I.V.,
            Nordberg,H.P., Cantor,M.N. and Hua,S.X.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAY-2016) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_017963641).
            
            ##Metadata-START##
            Organism Display Name :: Candida tanzawaensis NRRL Y-17324
            GOLD Stamp ID         :: Gp0009552
            ##Metadata-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Suhomyces tanzawaensis NRRL Y-17324"
                     /mol_type="mRNA"
                     /strain="NRRL Y-17324"
                     /type_material="type material of Candida tanzawaensis"
                     /db_xref="taxon:984487"
                     /chromosome="Unknown"
     gene            <1..>1158
                     /locus_tag="CANTADRAFT_91529"
                     /db_xref="GeneID:30985968"
     CDS             1..1158
                     /locus_tag="CANTADRAFT_91529"
                     /codon_start=1
                     /product="nonsense-mediated decay protein 4"
                     /protein_id="XP_020063219.1"
                     /db_xref="GeneID:30985968"
                     /db_xref="JGIDB:Canta1_91529"
                     /translation="

MSLHLFGSGKSDDQASYAGSTNSEPDVPTRSVNIILDHTAFVRGIGNIKRWFNEEYVKANHSHDLDTKILLNMYIPSYTLHEFDFVKKGISMTATNAREAIRFIDKFIEKEEQGTVSLLGQLVHRIYLESPREAGPNWEKCQKYQVHTPKIRDFPNFKTKFDSHLLGHQPVMERKGHDDLDDLTNNFSNSFSLRESHKTNDIQYENSASYQNALANSDQDAIMPARLRYLIRSCIYKRFIEKSVSKNPAEQWKLVTEDPITKIWARCFGIDCFNVNETEVLMFQNHDVNLIELYNPLLDFSAHDEGEHESNILRSTIDTTQYRYESIDQRPKFKNVAGAKARKRKTRQVDGVVREGYGVAGDQVKMERFDAINYAPRGTGELWKP"

     misc_feature    103..816
                     /locus_tag="CANTADRAFT_91529"
                     /note="PIN (PilT N terminus) domain: Superfamily; Region:
                     PIN_SF; cl28905"
                     /db_xref="CDD:452894"
ORIGIN      

atgtcactacatctgtttggctcaggtaagagtgatgatcaggctagttacgcaggaagcaccaacagtgagccggatgtaccaacaagatcggtcaacatcatccttgatcatactgcatttgtcagagggattggaaacataaagagatggttcaatgaagagtatgtcaaggcaaaccattcccatgacctagacaccaaaattctattgaacatgtacattccatcgtacaccttgcacgagtttgatttcgtcaaaaagggtatctcaatgactgctaccaatgctagggaagcaatcaggttcatcgacaagttcattgaaaaggaagaacaagggactgttagtctgctgggacagctcgtccaccggatctacctcgagtctccacgcgaggcaggacccaactgggaaaaatgccagaaatatcaagttcataccccgaaaatccgtgactttcccaacttcaaaaccaagttcgattcccatttgttgggtcaccaacctgtaatggagagaaaaggtcacgatgaccttgatgacttgactaataattttagcaactccttttcgttgagagaaagccacaagaccaacgatatccagtacgaaaactcggcatcttatcagaatgccctagcaaactctgaccaggatgccattatgcctgcacgtttgaggtatttaatccgctcgtgtatatacaagcggtttatcgaaaaatccgtaagcaagaatccagctgaacagtggaaattggtgactgaagacccgatcaccaagatctgggccagatgtttcgggatcgactgtttcaatgtcaacgaaaccgaggtgctcatgtttcagaaccatgatgtcaacctgatcgagctatacaacccactcctcgatttctcggcgcacgatgaaggtgagcacgagagtaatatccttcggagcaccatcgataccacccagtacaggtacgagagcattgaccagagacccaagttcaagaatgtagctggtgcaaaggcacgcaagaggaaaacccgccaagtagatggggttgtcagagaaggttatggagttgctggcgatcaggtcaagatggagcgttttgatgccattaattatgctccacggggcactggagaattgtggaagccataa

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