LOCUS       XM_017669269            1875 bp    mRNA    linear   MAM 17-APR-2025
DEFINITION  PREDICTED: Manis javanica vimentin (VIM), mRNA.
ACCESSION   XM_017669269
VERSION     XM_017669269.3
DBLINK      BioProject: PRJNA1247575
KEYWORDS    RefSeq.
SOURCE      Manis javanica (Malayan pangolin)
  ORGANISM  Manis javanica
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_133157) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 17, 2025 this sequence version replaced XM_017669269.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_040802235.1-RS_2025_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/14/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Manis javanica"
                     /mol_type="mRNA"
                     /isolate="MJ-LG"
                     /db_xref="taxon:9974"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="blood"
                     /dev_stage="adult"
     gene            1..1875
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 31 Proteins"
                     /db_xref="GeneID:108402616"
     CDS             159..1559
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_017524758.1"
                     /db_xref="GeneID:108402616"
                     /translation="

MSTRSVSSSSYRRMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSTSRSVYASSPGGMYATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"

     misc_feature    198..461
                     /gene="VIM"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:461414"
     misc_feature    462..1388
                     /gene="VIM"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:459643"
     polyA_site      1875
                     /gene="VIM"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gcagggtcccgtcctctgccactcttgctccggggtccccgtgttagagacgcagcagagctcacacagcccacacccaccgtgccctcgctcgcccgtcctccccgagccagtccgcgccgccgcagccacctagcccaccgccaccttctgcagccatgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcacagcaagccggccgagctccagccggagctacgtgaccacgtccacccgcacctacagcctgggcagcgcgctgcgccccagcaccagccgcagcgtctacgcttcgtccccaggcggcatgtacgccacgcgctcttcggctgtgcgcctgcggagcagtgtgcctggcgtgcggctgctacaggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgcaccaatgagaaggtggagctgcaggagctgaacgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagattctgctggccgagcttgagcagctcaagggccagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagcttcgccggcaggtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgaggacataatgcgtctccgggagaagttgcaggaggagatgcttcagagagaggaagccgaaagcaccctgcagtctttcagacaggatgttgacaatgcttctttggcacgtcttgaccttgagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgaggaggaaattcaggagcttcaggcccagattcaggaacagcatgtccaaatcgatgtggatgtttccaagcctgacctcacggccgccctgcgtgacgtccgtcagcaatacgaaagtgtggctgccaagaaccttcaggaggctgaggaatggtacaagtccaagtttgctgacctctctgaggctgctaaccgcaacaacgacgccctgcgccaggcgaagcaggagtcaaatgagtaccggagacaggtgcaatctctgacctgtgaggtggacgcgctgaaaggaactaatgagtctctggaacgccagatgcgtgaaatggaagagaactttgctgtcgaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaacatgaaggaagaaatggctcgtcaccttcgggaataccaggacctgctgaatgttaaaatggctcttgacatcgagattgccacctacaggaagctgctagaaggcgaggagagcaggatttctctgcctcttccaaatttttcttccctgaacctgagggaaaccaatctggattcactccctctggttgacactcactctaaaaggacacttctgattaagacggttgaaactagagatggacaggttataaatgaaacatctcagcaccatgatgatcttgagtgaaaattgcacacacatggtgcaacagtatattaccagcaagaacaaaaaaaaaatccgtatctacagaaacagctttcaagtgcctttctgcagtttttcaggagcgcaagatagatttggaataggaataagctctagttgttaagtatcaatacttctaaaagatttagaaagaagtttacaacataatctagtttacgaagaagtcttgtgctagaatacttttttaaaagtatttttgaataccattaaaactgcttttttccaacaagtatctgaccaacttgtttctgcttcaataaatctttgaaaactc

//