LOCUS       XM_017370210             638 bp    mRNA    linear   PLN 27-MAR-2024
DEFINITION  PREDICTED: Daucus carota subsp. sativus 10 kDa chaperonin,
            mitochondrial (LOC108201875), mRNA.
ACCESSION   XM_017370210
VERSION     XM_017370210.2
DBLINK      BioProject: PRJNA1062368
KEYWORDS    RefSeq.
SOURCE      Daucus carota subsp. sativus
  ORGANISM  Daucus carota subsp. sativus
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae;
            Scandiceae; Daucinae; Daucus; Daucus sect. Daucus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_030389) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Mar 27, 2024 this sequence version replaced XM_017370210.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_001625215.2-RS_2024_03
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 03/08/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Daucus carota subsp. sativus"
                     /mol_type="mRNA"
                     /sub_species="sativus"
                     /db_xref="taxon:79200"
                     /chromosome="9"
     gene            1..638
                     /gene="LOC108201875"
                     /note="10 kDa chaperonin, mitochondrial; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 long SRA reads, 13 Proteins"
                     /db_xref="GeneID:108201875"
     CDS             119..412
                     /gene="LOC108201875"
                     /codon_start=1
                     /product="10 kDa chaperonin, mitochondrial"
                     /protein_id="XP_017225699.1"
                     /db_xref="GeneID:108201875"
                     /translation="

MAKRLIPTLNRVLIEKIVPPSKTTAGILLPEKSSKLNSGKVVAVGPGALDKSGNKIPVAVKEGDTVLLPEYGGTQVKLGEKEYHLFRDDDILGTLHD"

     misc_feature    128..403
                     /gene="LOC108201875"
                     /note="Chaperonin 10 Kd subunit; Region: Cpn10;
                     smart00883"
                     /db_xref="CDD:197951"
     misc_feature    order(128..130,134..136,140..142,149..151,227..232,
                     293..295,323..325,338..340,344..346,392..400)
                     /gene="LOC108201875"
                     /note="oligomerisation interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:238197"
     misc_feature    176..217
                     /gene="LOC108201875"
                     /note="mobile loop [active]"
                     /db_xref="CDD:238197"
     misc_feature    order(254..256,287..289)
                     /gene="LOC108201875"
                     /note="roof hairpin [active]"
                     /db_xref="CDD:238197"
     polyA_site      638
                     /gene="LOC108201875"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gtctagaaccttctcccctctccacaaccccagagttaaaacatttggcttgaaaagaaaaaagacatttggctcatttttagcacacaattgagggctattctctacaacagcagcaatggctaagcgtttgatcccaactctcaacagagtcctcatcgaaaaaatcgtccccccctccaaaaccaccgctgggattctcctccctgagaaatcttccaagctgaattcggggaaagtggtggcggttggaccaggggctcttgataaatcaggcaataagataccagtggctgtgaaggaaggggacactgttcttttgccggagtatggtggtacccaagtcaagctcggcgagaaagagtatcacttgttcagggatgacgatatcttgggcactctccatgactgatatatgaccacttaaggtttttcgacttgaatatgtgataaaaattgattatcggaggtttttaaactattaccaaagctttaaattttagtgtttttcggagatttagttttggttttggagtttgaattctccgagtgtatcagtgatacagtattgatatgacttttcatattatgccggaacaaagtaatgaaagttaaaagacaatctcttcttgttttta

//