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Previous release (v1)
2025-11-03 23:51:35, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_013559232 474 bp mRNA linear INV 28-FEB-2018
DEFINITION PREDICTED: Lingula anatina protein FAM84B-like (LOC106176727),
mRNA.
ACCESSION XM_013559232
VERSION XM_013559232.1
DBLINK BioProject: PRJNA293030
KEYWORDS RefSeq; includes ab initio.
SOURCE Lingula anatina
ORGANISM Lingula anatina
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Brachiopoda;
Linguliformea; Lingulata; Lingulida; Linguloidea; Lingulidae;
Lingula.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_019775411.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Lingula anatina Annotation Release
101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 100% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..474
/organism="Lingula anatina"
/mol_type="mRNA"
/isolate="Amm_Jpn"
/isolation_source="intertidal zone"
/db_xref="taxon:7574"
/chromosome="Unknown"
/sex="male"
/tissue_type="Gonads"
/dev_stage="adult"
/geo_loc_name="Japan: Amami, Kasari Bay"
/lat_lon="28.4406 N 129.6676 E"
/collection_date="2012"
/collected_by="Nori Satoh, Kazuyoshi Endo"
/identified_by="Kazuyoshi Endo"
gene 1..474
/gene="LOC106176727"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins"
/db_xref="GeneID:106176727"
CDS 1..474
/gene="LOC106176727"
/codon_start=1
/product="protein FAM84B-like"
/protein_id="XP_013414686.1"
/db_xref="GeneID:106176727"
/translation="
MEDVRRHNQAVLDSLVPGDLVEFQRSWLFSHWAVYIGNEEVVHFIERNSGGVFSSSSERSMTGVVRRDSFWTVAGRSKAFKNNRRDAKYSCDVIVTRALSKLGVSEFNLFLRNSEHFVAWCRYGEECSEQAQTIWTMFLGSMAVIVGGIAALTGLRR"
misc_feature 82..375
/gene="LOC106176727"
/note="Lecithin retinol acyltransferase; Region: LRAT;
pfam04970"
/db_xref="CDD:398571"
ORIGIN
atggaagacgtgaggcgtcataaccaggcagtgttagattcccttgtgccgggagacctggtggagttccaaaggtcgtggctcttctcccactgggccgtttatattggtaatgaagaagtggtccattttattgaacgcaattcaggaggtgtcttcagttcctctagtgagcgttctatgacgggggtagttcgaagggattccttttggacagtggcagggaggagtaaggcgttcaaaaacaacagaagggacgccaaatacagctgtgatgtgatagtgacgagggctctgtcaaagctgggagtgagcgagttcaatctcttcttgagaaatagtgaacattttgtagcctggtgtagatatggtgaagagtgcagtgaacaggcacaaaccatctggacaatgtttttggggtctatggctgtaattgtggggggcattgccgcactcactggccttaggcgatag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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