LOCUS       XM_011747810            2918 bp    mRNA    linear   PRI 24-APR-2018
DEFINITION  PREDICTED: Macaca nemestrina retina and anterior neural fold
            homeobox 2 (RAX2), transcript variant X1, mRNA.
ACCESSION   XM_011747810
VERSION     XM_011747810.2
DBLINK      BioProject: PRJNA279145
KEYWORDS    RefSeq.
SOURCE      Macaca nemestrina (pig-tailed macaque)
  ORGANISM  Macaca nemestrina
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_012010576.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 24, 2018 this sequence version replaced XM_011747810.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Macaca nemestrina Annotation Release
                                           101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Macaca nemestrina"
                     /mol_type="mRNA"
                     /isolate="M95218"
                     /db_xref="taxon:9545"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="blood"
     gene            1..2918
                     /gene="RAX2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 mRNAs, 4 ESTs, 7 Proteins, and
                     79% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:105485450"
     CDS             728..1420
                     /gene="RAX2"
                     /codon_start=1
                     /product="retina and anterior neural fold homeobox protein
                     2 isoform X1"
                     /protein_id="XP_011746112.1"
                     /db_xref="GeneID:105485450"
                     /translation="

MPAPVEGTDLPGAGRQAWGSPALSLPVAPPAVSPPSVPLPSRQVGAMFLSPGEGPAAEGGSLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPTLPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA"

     misc_feature    order(947..961,965..967,1016..1018,1034..1036,1073..1075,
                     1079..1084,1091..1096,1100..1108,1112..1117)
                     /gene="RAX2"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(953..955,962..964,1082..1084,1091..1096,1103..1105)
                     /gene="RAX2"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    956..1114
                     /gene="RAX2"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
ORIGIN      

accgcgcccgtctgtgaatggtgaactcctattcatacctcaagacccagttaaaagggcctctgccccttgtgtccaaaagagccaactgcagtgccttcacctctgggacctcagcttccccaaccccctctgacctctgtgagtcctaagacacctttttctgcccccagcagataaaagtattaacaatgggcattcattaagtgccccctgtatgccaatttctgtgcgatgctctgagaagctgaaatccccccagggtaggtcctagtgtggcagttttacagccagggaaactgaggcccagggaggaagagccccgtggcatcttatggcgaggggcggtggagcccggcagactatccccccagcctccacctggagctgcagccctccgcccaccctgccctccctcctggctcaggacagcccggggaccgagtgggaggtgccgcctcaattaatcaccttgagctaatcctcccccacccaaccccgacccggctcaggtctggcagggccaggccacagcagacgcggcgccgggcccgctggggcaggtgccctgtggagattgacagaggggctgccgtgggcggccgtgacaaccacagagaggggaagagaaaacagggacggtgacacacagagaaggaagaacagacagaggcccagcaggagacccccacaagcccgaggaggacagcccggggatgcagagcgcatgccggccccagtggagggaacagatctccccggagccgggaggcaagcctggggctcccctgccctgtccctgccggtagcccccccggccgtctccccgccatctgtcccgctgccgtctcgccaggtgggagccatgttcctgagcccgggcgagggcccggcggccgagggtgggagtctggggccgggcgaggaggcccccaagaagaagcaccggaggaaccgcaccaccttcaccacctaccagctgcaccagctggagcgggcgttcgaggcctcccactacccggatgtctacagccgtgaggagctggcggccaaggtgcacctacctgaggtgcgcgtgcaggtgtggttccagaaccgccgggccaagtggcgccgccaggagcggctggagtcaggctcgggtgccgtggcagccccgagacttcctgaggccccaacgctgcccttcgcccgccccccggccatgtcgctgcccctggagccctggttgggccctggaccgccggccgtgccaggcctcccccgcctcctgggcccgggcccggggctgcaagcatccttcgggcctcatgcctttgctcctaccttcgcagacggcttcgccctggaggaggcgtccctgcggctgctggccaaggaacacgcacaggctctggacagggcttggccgccagcctgagcctgctgccctcctgggccccctcctcggttcagcctgagagctggagacgtgccctggtgacagccaccacgccttggcctaggctgaggtcacggagcaaccgtggtcaggccaggccaccatcactggggagcgggaccagagacaggctgctgggtcccccgcccccatcctgtcccccacctgatcaccacccgtcctgctggcagcggaccggccccagtgtcaggcaggaggtgacccaagtattcctaggccagggacggggaccctcctcccctcctgaggcctcagtctcccgtctgttaatggggtgtgggggcctctgaggttcccgggctgtgaggctgagtggcggggccgctgactctgtaagatgagtgtacatctctctgccgctcccactccccatcagcagagctgcccgctctccaggctcccggtccccccgaaatgacagtaatggcagctcccgcgagcctgctctcctttcacggtgcacccaccacgtgagcgctcccctctccgttgcgccctggacctcgggcacagccatcagcccattctacagagaggaaaactggggctcaggcaggaagccaggtccccaaggttgcacggctaggagtgggtgaagctgcctttcagacccatcaccggcccccccatccgaggcacggcagcaggttctggagggagggtggggcctcgtgtggaggcgggctggtgctggctgtgtcgtcatcagcccctgttcctcccgtccccacagaccccaggccccgtgcatgtcctccagccctgcggaggcacggctggcgtctgctctgtccaacccagttgcattgcccaagagctctgaggaaggaggctgtcgcggggctgagaacccgctgtgactggcaagcatggctggcccagtgcagcaggaggggccctgagccatgggatgggacagtcttggccagggccaccccctgagacagaagtgcggcaccagggcaggagctgcagtagctaccctcctcgtctccagcccgggctccccagatcactcccagatcactggggcaccccatctccaggcggcacctcacacactagtcttgtggcccaacgcccagccaatgtcagtgtgcaccaggcactggggacacggcagtaagcacaagaaagatttttttttctttttaacctaaaccaggccaggtgcggtggctcatgcctgtaatcccagtgctttgggacgctgaggtgggaggattgcttgagaccagtctgggtgacatagcaagactcagtctccacaaacatttttaaaacgtgccaggtgtagtggtgcacacttgtcatcccagggacccgagaagctgaggcaggaggattgcttgagcccagaaggtcgaggctgagctgtgatcacaccactgcattccagcctgtgcaacagagccagaccccgactcaaaacaaataaataaaaaccaaacctaaa

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