ver.2
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Previous release (v1)
2025-11-08 14:04:43, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_010680384 689 bp mRNA linear PLN 13-JUN-2023
DEFINITION PREDICTED: Beta vulgaris subsp. vulgaris hypothetical protein
(LOC104894204), mRNA.
ACCESSION XM_010680384
VERSION XM_010680384.4
DBLINK BioProject: PRJNA973951
KEYWORDS RefSeq.
SOURCE Beta vulgaris subsp. vulgaris (sugar beet)
ORGANISM Beta vulgaris subsp. vulgaris
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_079206) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On Jun 13, 2023 this sequence version replaced XM_010680384.3.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_026745355.1-RS_2023_06
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.1
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 06/07/2023
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..689
/organism="Beta vulgaris subsp. vulgaris"
/mol_type="mRNA"
/cultivar="EL10"
/sub_species="vulgaris"
/db_xref="taxon:3555"
/chromosome="5"
/tissue_type="leaf"
/dev_stage="adult"
/geo_loc_name="USA"
gene 1..689
/gene="LOC104894204"
/note="hypothetical protein; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 3
Proteins"
/db_xref="GeneID:104894204"
CDS 202..462
/gene="LOC104894204"
/codon_start=1
/product="uncharacterized protein LOC104894204"
/protein_id="XP_010678686.1"
/db_xref="GeneID:104894204"
/translation="
MASGNTNYESSWADQWDPQPAYVSHENESKNKKKNNESGGGAKKKVEEGLTKTKEVASTSFKKVKQGTSMGISWIKDKYHKTTQKH"
polyA_site 689
/gene="LOC104894204"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
ggtggaaatattcttcatttcccaccgtcatacgacattatatatatacacacaacatttcatcaaaacatttaagcaatcacaatttcaggaagcctttaaatctcaaaacaatctcttctttcttcttaaagcttaacaaattaaaacaatctcttcttgtttcttcatagttttaagattttacaagtataaataaaaatggcatcaggaaacacaaattatgagagttcatgggcagatcagtgggacccacaaccagcttatgtaagccatgaaaatgaaagcaaaaacaagaagaagaataatgaatcaggaggaggtgcaaagaagaaagttgaagaagggcttaccaaaactaaagaagttgcttctactagtttcaagaaggtcaaacagggtacttctatgggtatcagttggatcaaagacaagtatcataagaccacccaaaaacattaaatcatcatattataaacttctttttatttcatgttatgtaattatttcatttgattcatgatttatatcttaggttgatgattattatgggtatctgtatatcttatccgatctgatttgatttgatttgctttggtttgttaatcaagcaaatttttttgtaattgactattgaatcgtttctttctctttattttcttgaatatactccacttatcttttgatca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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