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Previous release (v1)
2025-10-29 21:51:36, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_006675794 841 bp mRNA linear PLN 18-JAN-2024
DEFINITION Batrachochytrium dendrobatidis JAM81 N-terminal protein
methyltransferase (BATDEDRAFT_36418), mRNA.
ACCESSION XM_006675794
VERSION XM_006675794.1
DBLINK BioProject: PRJNA225502
BioSample: SAMN02746048
KEYWORDS RefSeq.
SOURCE Batrachochytrium dendrobatidis JAM81
ORGANISM Batrachochytrium dendrobatidis JAM81
Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota;
Chytridiomycota incertae sedis; Chytridiomycetes; Rhizophydiales;
Rhizophydiales incertae sedis; Batrachochytrium.
REFERENCE 1 (bases 1 to 841)
AUTHORS Kuo,A., Salamov,A., Schmutz,J., Lucas,S., Pitluck,S., Rosenblum,E.,
Stajich,J., Eisen,M. and Grigoriev,I.V.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The draft genome of Batrachochytrium dendrobatidis
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 841)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2024) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 841)
AUTHORS Kuo,A., Salamov,A., Schmutz,J., Lucas,S., Pitluck,S., Rosenblum,E.,
Stajich,J., Eisen,M. and Grigoriev,I.V.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (01-DEC-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_006281099).
##Metadata-START##
Organism Display Name :: Batrachochytrium dendrobatidis JAM81
GOLD Stamp ID :: Gi01093
Diseases :: Chytridiomycosis
Habitat :: Fresh water
Phenotypes :: Chytrid, Non-filamentous, Pathogen
##Metadata-END##
FEATURES Location/Qualifiers
source 1..841
/organism="Batrachochytrium dendrobatidis JAM81"
/mol_type="mRNA"
/strain="JAM81"
/db_xref="taxon:684364"
/chromosome="Unknown"
gene 1..841
/locus_tag="BATDEDRAFT_36418"
/db_xref="GeneID:18241079"
CDS 25..726
/locus_tag="BATDEDRAFT_36418"
/note="similar to UPF0351 protein C9orf32 homolog;
expressed hypothetical protein"
/codon_start=1
/product="N-terminal protein methyltransferase"
/protein_id="XP_006675857.1"
/db_xref="GeneID:18241079"
/db_xref="InterPro:IPR008576"
/db_xref="JGIDB:Batde5_36418"
/translation="
MIDTEEADVYINSRNEWYTDAASYWEQIEPTVQGMLGGFGFLTHIDAKGSSSFISEFVASDTDSPPRLDTKKACDCGAGIGRVSETFLLKTFDRVDLVEQNAQFLNTAKANFKENGLDNRVDAYIPLGLQEFSPEEGQYDLIWCQWVLGHLKDDDLVSFFQRCKKGLKPNGMIGVKENIAHQGILIDKEDSSMTRCEEILVEIMHRAGLTIVKQETQSGFPKELFAVKMFLLS"
misc_feature 64..720
/locus_tag="BATDEDRAFT_36418"
/note="AdoMet dependent proline di-methyltransferase;
Region: Methyltransf_PK; pfam05891"
/db_xref="CDD:461771"
ORIGIN
ccttgattgctcactattactactatgattgatacagaggaggctgatgtgtacatcaacagtcgtaatgaatggtacactgatgctgccagctactgggaacagatcgaacctacagtccaaggcatgctgggaggatttggatttctgactcatattgatgcaaaaggatcatcttcgtttatttccgagtttgtcgcttcagacactgactctccaccaaggctcgataccaagaaagcatgtgactgtggtgctggcattggtcgagtatcagaaacgtttttattaaagacatttgacagagtagacttggtggagcaaaatgcacagtttttaaatacagccaaagccaattttaaagaaaatggtttggacaatcgtgtggatgcatatatccctttaggactgcaggaattttctccagaggaaggtcaatatgacctgatttggtgtcagtgggtacttggacatcttaaagatgatgatctagtaagtttttttcagcgatgcaaaaagggtctcaagccaaatggtatgattggtgttaaggaaaatattgcgcaccaaggcattctgattgacaaagaggacagcagtatgaccagatgtgaggagattcttgttgaaatcatgcatcgtgctggactcacgattgtcaagcaggaaacgcaatctggattcccaaaagaactgtttgctgttaaaatgtttctgctcagctaaacacgctattggatctcgtcaagtttgacttgagtttcttaccaccgtttgtccagtctaaatggtccggtggtatagcttagccagtagttttaaatgaaaatatactttagat
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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