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Previous release (v1)
2026-05-14 01:53:14, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_006445687 1112 bp mRNA linear PLN 26-FEB-2018
DEFINITION PREDICTED: Citrus clementina protein STRICTOSIDINE SYNTHASE-LIKE 4
(LOC18050416), mRNA.
ACCESSION XM_006445687
VERSION XM_006445687.2
DBLINK BioProject: PRJNA232045
KEYWORDS RefSeq.
SOURCE Citrus x clementina
ORGANISM Citrus x clementina
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae;
Citrus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_006262688.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On Feb 26, 2018 this sequence version replaced XM_006445687.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Citrus clementina Annotation Release
100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1112
/organism="Citrus x clementina"
/mol_type="mRNA"
/cultivar="Clemenules"
/db_xref="taxon:85681"
/chromosome="Unknown"
gene 1..1112
/gene="LOC18050416"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 7 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 1 sample with support for all annotated introns"
/db_xref="GeneID:18050416"
CDS 19..1095
/gene="LOC18050416"
/codon_start=1
/product="protein STRICTOSIDINE SYNTHASE-LIKE 4"
/protein_id="XP_006445750.1"
/db_xref="GeneID:18050416"
/translation="
MAPKSFLLACLLAFTLQFFFSPPVSSSASLLSTSKESSSMKDLIKLGEGCVSHPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTATKEGDVIICDSKKGLFKVTEEGVKVLDPDVRFANDVIDASDGTLYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGIALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDGSFWIALIKMNQTGVKAIQNCREKWELLEAYPGLISLLLPMGSDAGARVVKVEGIDGKIIRDFNDPNATYLSFVTSAVEYNDNLFLASLQSNFIGVLPLHPLDTPKPVLATI"
misc_feature 151..>777
/gene="LOC18050416"
/note="Sugar lactone lactonase YvrE [Carbohydrate
transport and metabolism]; Region: YvrE; COG3386"
/db_xref="CDD:442613"
misc_feature 430..681
/gene="LOC18050416"
/note="Strictosidine synthase; Region: Str_synth; cl22863"
/db_xref="CDD:354965"
ORIGIN
agtagtgatttcaagctcatggctccgaagagtttcctgctagcttgtttacttgcttttactctacaattcttcttctcgcctccagtatcatcttcagcttctcttctttccacctccaaggaaagctcctctatgaaggatttgattaaacttggagaaggatgtgtgagccacccagaggatgtttctgttgtggttagaaagggtgcgctgtatacagctactaatgatggttgggtcaagtatttcatcctccataatgaaaccttggttaattggaagcacatagacagtcaatctcttcttggactcacagcaacaaaggaaggtgacgtcattatatgcgacagtaaaaaaggtttgtttaaggttaccgaagaaggcgtaaaggttcttgatccagatgtaagatttgcaaatgatgtgatcgatgcatcagatggcacgttgtattttactgtctcaagcaccaaatatacccccgcagatttctacaaagacatggctgagggaaatccttacggccagttgctcaaatatgatcctaaatcgaaccaaacaacagttttgcaagagggattttactttgctaatggcattgcactctcaaaagatgaagactttgtggtcgtttgtgaatcatggaaattccgatgcagaagatattggctgaagggcgatcgcaatggaacattagatacttttgctgaaaaccttccaggtggacctgataacatcaatcttgcccccgatggctctttttggattgctttaatcaagatgaatcagactggggtgaaggctatccaaaactgcagggagaaatgggaactattggaagcatatccaggattaatcagcctactcctccctatgggcagtgatgcgggtgcaagagtagtcaaagtcgaaggaattgatggcaaaataatcagggattttaacgatccgaatgcaacctatttatcatttgtcacttcagctgtggagtataatgacaatctcttcttggctagccttcaatcaaatttcattggggtactgccactccatcccctcgatactccaaaaccagtactggctaccatatagaaacaggatgcatgcat
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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